Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
GTF2A1P52655 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
GTF2A1P52655 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GTF2A1P52655 DHX40P1-201ENST00000588725 1412 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AL592148.3-201ENST00000608771 2646 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC017002.4-201ENST00000604721 1525 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 SNORD35B-201ENST00000363660 87 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 SNORA51.4-201ENST00000364993 124 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 U8.9-201ENST00000365667 134 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GTF2A1P52655 AL356387.2-201ENST00000422272 243 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AL627308.1-201ENST00000435693 821 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC073648.4-201ENST00000442655 781 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF2A1P52655 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF2A1P52655 RPL21P8-201ENST00000465083 535 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC105233.1-201ENST00000498840 781 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.62□□□□□ -1.83
GTF2A1P52655 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF2A1P52655 MIR4270-201ENST00000581799 70 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AC068790.7-201ENST00000602347 528 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC100827.5-201ENST00000615883 426 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AC018445.2-201ENST00000622987 260 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AL392088.2-201ENST00000637607 285 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 AL118496.1-201ENST00000440201 1812 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 CR788268.1-201ENST00000603931 1809 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 CIR1P2-201ENST00000514821 1342 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GTF2A1P52655 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF2A1P52655 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF2A1P52655 AL158163.1-201ENST00000603915 1649 ntBASIC3.62□□□□□ -1.83
GTF2A1P52655 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC007823.1-201ENST00000569932 1566 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 OR4K15-201ENST00000305051 1216 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 RPL21P3-201ENST00000395517 478 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AL360081.1-201ENST00000428299 555 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 VN1R54P-201ENST00000435210 1049 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 TRIM60P18-201ENST00000441518 828 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 AC016724.1-201ENST00000453215 421 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC146507.2-201ENST00000460608 476 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 RPL21P11-201ENST00000461458 483 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 RN7SKP282-201ENST00000516824 299 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 SNORA31.26-201ENST00000517250 137 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC022655.2-201ENST00000577280 318 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.61□□□□□ -1.83
GTF2A1P52655 AC092354.2-201ENST00000607786 514 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 FAM25E-202ENST00000608562 189 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 SDR42E1P1-201ENST00000611327 477 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 MIR7155-201ENST00000615925 56 ntBASIC3.61□□□□□ -1.83
GTF2A1P52655 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
GTF2A1P52655 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
GTF2A1P52655 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GTF2A1P52655 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.6□□□□□ -1.83
GTF2A1P52655 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 OR56B2P-202ENST00000641377 2453 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
GTF2A1P52655 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 SNORA26.7-201ENST00000391288 122 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 SAR1AP2-201ENST00000392696 594 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.6□□□□□ -1.83
GTF2A1P52655 RN7SKP58-201ENST00000411010 305 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 PRELID3BP11-201ENST00000414230 479 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 BMS1P22-201ENST00000414726 313 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.6□□□□□ -1.83
GTF2A1P52655 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AL139281.1-201ENST00000422120 335 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.6□□□□□ -1.83
GTF2A1P52655 MTCO1P43-201ENST00000431831 488 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 AC011998.1-201ENST00000433403 117 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 RPL12P3-201ENST00000440080 396 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC104308.1-201ENST00000454621 333 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 RN7SL98P-201ENST00000462271 300 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms