Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.72□□□□□ -1.81
RFC3P40938 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.72□□□□□ -1.81
RFC3P40938 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.72□□□□□ -1.81
RFC3P40938 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.72□□□□□ -1.81
RFC3P40938 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.72□□□□□ -1.81
RFC3P40938 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.72□□□□□ -1.81
RFC3P40938 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.72□□□□□ -1.81
RFC3P40938 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.72□□□□□ -1.81
RFC3P40938 MIR5684-201ENST00000585074 65 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AL355816.1-201ENST00000607951 118 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AC245389.2-201ENST00000616023 576 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AC099669.2-201ENST00000616549 437 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AC242843.1-201ENST00000618702 573 ntBASIC3.72□□□□□ -1.81
RFC3P40938 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.72□□□□□ -1.81
RFC3P40938 AC008785.1-201ENST00000624475 456 ntBASIC3.72□□□□□ -1.81
RFC3P40938 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFC3P40938 AC007342.9-201ENST00000623877 1385 ntBASIC3.72□□□□□ -1.81
RFC3P40938 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFC3P40938 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
RFC3P40938 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
RFC3P40938 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RFC3P40938 RNU1-15P-201ENST00000353977 144 ntBASIC3.71□□□□□ -1.82
RFC3P40938 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.71□□□□□ -1.82
RFC3P40938 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
RFC3P40938 UBTFL3-201ENST00000418934 1024 ntBASIC3.71□□□□□ -1.82
RFC3P40938 RPL30P3-201ENST00000424262 333 ntBASIC3.71□□□□□ -1.82
RFC3P40938 PRELID3BP10-201ENST00000431957 584 ntBASIC3.71□□□□□ -1.82
RFC3P40938 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RFC3P40938 MTCO1P52-201ENST00000433928 531 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.71□□□□□ -1.82
RFC3P40938 TPTE2P1-204ENST00000435256 593 ntBASIC3.71□□□□□ -1.82
RFC3P40938 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 AF228730.2-201ENST00000438784 848 ntBASIC3.71□□□□□ -1.82
RFC3P40938 CBX1P4-201ENST00000439415 457 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.71□□□□□ -1.82
RFC3P40938 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.71□□□□□ -1.82
RFC3P40938 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.71□□□□□ -1.82
RFC3P40938 RPS11P1-201ENST00000451072 473 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AP002345.1-201ENST00000456493 928 ntBASIC3.71□□□□□ -1.82
RFC3P40938 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.71□□□□□ -1.82
RFC3P40938 UBTFL6-201ENST00000477929 1024 ntBASIC3.71□□□□□ -1.82
RFC3P40938 RPL29P14-201ENST00000495837 428 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AC023050.1-201ENST00000498198 304 ntBASIC3.71□□□□□ -1.82
RFC3P40938 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.71□□□□□ -1.82
RFC3P40938 MTCO1P49-201ENST00000523429 802 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.71□□□□□ -1.82
RFC3P40938 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.71□□□□□ -1.82
RFC3P40938 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.71□□□□□ -1.82
RFC3P40938 AC063950.1-201ENST00000552036 308 ntBASIC3.71□□□□□ -1.82
RFC3P40938 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.71□□□□□ -1.82
RFC3P40938 AGGF1P8-201ENST00000562979 1000 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AC074050.1-201ENST00000563247 211 ntBASIC3.71□□□□□ -1.82
RFC3P40938 AC025627.2-201ENST00000576220 160 ntBASIC3.71□□□□□ -1.82
RFC3P40938 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.71□□□□□ -1.82
RFC3P40938 MIR6868-201ENST00000611215 58 ntBASIC3.71□□□□□ -1.82
RFC3P40938 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.71□□□□□ -1.82
RFC3P40938 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
RFC3P40938 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.71□□□□□ -1.82
RFC3P40938 CDRT1-208ENST00000630868 794 ntBASIC3.71□□□□□ -1.82
RFC3P40938 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.71□□□□□ -1.82
RFC3P40938 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
RFC3P40938 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFC3P40938 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.82
RFC3P40938 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RFC3P40938 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 AL358472.1-201ENST00000431295 329 ntBASIC3.7□□□□□ -1.82
RFC3P40938 RPS24P8-201ENST00000431490 402 ntBASIC3.7□□□□□ -1.82
RFC3P40938 RPS26P40-201ENST00000435209 294 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 Z95327.1-201ENST00000446082 482 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC079804.1-201ENST00000461922 436 ntBASIC3.7□□□□□ -1.82
RFC3P40938 RPL21P71-201ENST00000465598 459 ntBASIC3.7□□□□□ -1.82
RFC3P40938 RPL7P1-201ENST00000468161 747 ntBASIC3.7□□□□□ -1.82
RFC3P40938 RPL7P9-201ENST00000468715 747 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC091959.2-201ENST00000477363 321 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AP000926.1-201ENST00000479573 241 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC068305.1-201ENST00000497406 726 ntBASIC3.7□□□□□ -1.82
RFC3P40938 OR52A4P-203ENST00000498233 1014 ntBASIC3.7□□□□□ -1.82
RFC3P40938 BNIP3P41-201ENST00000503774 571 ntBASIC3.7□□□□□ -1.82
RFC3P40938 HMGB1P47-201ENST00000511281 589 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.7□□□□□ -1.82
RFC3P40938 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.7□□□□□ -1.82
RFC3P40938 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms