Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU1-132P-201ENST00000364300 164 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 RNU1-63P-201ENST00000383902 164 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 ATP5F1P3-201ENST00000397213 657 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AL121834.1-202ENST00000404494 277 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC092745.2-202ENST00000411880 369 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 NRBF2P2-201ENST00000413087 861 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
HOXC13P31276 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC068135.1-201ENST00000446164 246 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 FGF7P3-201ENST00000454645 303 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC053481.1-201ENST00000467217 306 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC087385.1-201ENST00000475062 312 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 RPL21P47-201ENST00000483696 477 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 MTCO2P9-201ENST00000503214 694 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 ARL4AP1-201ENST00000503220 705 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC008565.1-201ENST00000509046 885 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC083923.1-201ENST00000523708 376 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 AP001160.4-201ENST00000596971 382 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC005776.1-201ENST00000603164 290 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AL357094.1-201ENST00000603845 844 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC011458.1-201ENST00000604034 617 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 MIR8084-201ENST00000614105 89 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC13P31276 AC095038.2-201ENST00000621464 1070 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC091905.2-201ENST00000623143 306 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 AC112200.1-201ENST00000625015 234 ntBASIC4.62□□□□□ -1.67
HOXC13P31276 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HOXC13P31276 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC13P31276 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
HOXC13P31276 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC13P31276 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 AC008033.1-201ENST00000216407 1162 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 ENSAP3-201ENST00000312710 333 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXC13P31276 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC13P31276 AC011933.1-201ENST00000413334 321 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 RPS15AP40-201ENST00000419621 391 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC13P31276 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 MTCYBP32-201ENST00000427945 1084 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 CDY14P-201ENST00000431260 1014 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 CDY12P-201ENST00000440679 1015 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 CDY13P-201ENST00000445813 1015 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC114755.5-201ENST00000447760 831 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 CDY23P-201ENST00000451661 1014 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC13P31276 AC012671.1-201ENST00000451912 203 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC116533.1-201ENST00000459748 321 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 AC108022.1-201ENST00000493466 478 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 OR5H3P-201ENST00000502817 919 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC13P31276 AC104108.1-201ENST00000509930 412 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 RN7SKP157-201ENST00000516174 282 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC023632.4-201ENST00000517783 191 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC13P31276 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC13P31276 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXC13P31276 AL139286.1-201ENST00000604465 483 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AL359535.1-201ENST00000612100 1087 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 FRG1HP-204ENST00000617940 757 ntBASIC4.61□□□□□ -1.67
HOXC13P31276 AC006065.5-201ENST00000623427 349 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms