Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 AL365400.2-201ENST00000605604 902 ntBASIC3.89□□□□□ -1.79
SHC1P29353 MIR432-201ENST00000606207 94 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC114781.5-201ENST00000615297 108 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC138907.10-201ENST00000623708 983 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC120349.3-201ENST00000624377 529 ntBASIC3.89□□□□□ -1.79
SHC1P29353 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 AC017104.5-201ENST00000637647 639 ntBASIC3.89□□□□□ -1.79
SHC1P29353 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 AL445437.1-201ENST00000623157 3087 ntBASIC3.89□□□□□ -1.79
SHC1P29353 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC093535.2-201ENST00000624769 2326 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC012020.1-201ENST00000624541 1728 ntBASIC3.89□□□□□ -1.79
SHC1P29353 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHC1P29353 AP000756.2-201ENST00000624168 2567 ntBASIC3.88□□□□□ -1.79
SHC1P29353 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHC1P29353 RNA5SP388-201ENST00000362584 119 ntBASIC3.88□□□□□ -1.79
SHC1P29353 RNA5SP175-201ENST00000364275 119 ntBASIC3.88□□□□□ -1.79
SHC1P29353 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 RNA5SP36-201ENST00000410197 133 ntBASIC3.88□□□□□ -1.79
SHC1P29353 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC011933.1-201ENST00000413334 321 ntBASIC3.88□□□□□ -1.79
SHC1P29353 MTATP6P20-201ENST00000414147 562 ntBASIC3.88□□□□□ -1.79
SHC1P29353 MTCO2P21-201ENST00000419780 677 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.88□□□□□ -1.79
SHC1P29353 RPS26P47-201ENST00000427219 348 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AL353597.2-202ENST00000434901 373 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 MTND6P18-201ENST00000439477 513 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 PTMAP3-201ENST00000447474 330 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AL451050.1-201ENST00000450126 415 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 SNORD11.1-201ENST00000459482 85 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC116533.1-201ENST00000459748 321 ntBASIC3.88□□□□□ -1.79
SHC1P29353 RN7SL303P-201ENST00000469773 251 ntBASIC3.88□□□□□ -1.79
SHC1P29353 CEACAMP10-202ENST00000495431 496 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC083829.1-201ENST00000503756 657 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC139783.2-201ENST00000504847 1145 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.88□□□□□ -1.79
SHC1P29353 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHC1P29353 AC092593.2-201ENST00000513866 913 ntBASIC3.88□□□□□ -1.79
SHC1P29353 MTCYBP19-201ENST00000517463 1124 ntBASIC3.88□□□□□ -1.79
SHC1P29353 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 MTCYBP23-201ENST00000558717 1102 ntBASIC3.88□□□□□ -1.79
SHC1P29353 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 AC010735.1-201ENST00000567305 1026 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.88□□□□□ -1.79
SHC1P29353 MIR3138-201ENST00000585238 82 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC068790.5-201ENST00000602741 355 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC022022.2-201ENST00000602989 360 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC012603.1-201ENST00000606424 528 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC093673.2-201ENST00000609674 331 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC245100.7-201ENST00000609678 442 ntBASIC3.88□□□□□ -1.79
SHC1P29353 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 AC093783.1-201ENST00000612976 329 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AP002791.1-201ENST00000623291 381 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC019278.1-201ENST00000623516 479 ntBASIC3.88□□□□□ -1.79
SHC1P29353 RPL23AP61-201ENST00000623642 466 ntBASIC3.88□□□□□ -1.79
SHC1P29353 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
SHC1P29353 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SHC1P29353 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHC1P29353 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHC1P29353 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.88□□□□□ -1.79
SHC1P29353 MFSD8-242ENST00000641690 4199 ntBASIC3.88□□□□□ -1.79
SHC1P29353 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.88□□□□□ -1.79
SHC1P29353 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHC1P29353 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHC1P29353 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.87□□□□□ -1.79
SHC1P29353 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.87□□□□□ -1.79
SHC1P29353 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHC1P29353 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHC1P29353 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHC1P29353 AL512430.2-201ENST00000406786 339 ntBASIC3.87□□□□□ -1.79
SHC1P29353 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.87□□□□□ -1.79
SHC1P29353 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.87□□□□□ -1.79
SHC1P29353 XKRYP4-201ENST00000414395 483 ntBASIC3.87□□□□□ -1.79
SHC1P29353 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms