Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD40P25942 AC007529.1-201ENST00000418574 2178 ntBASIC4.98□□□□□ -1.61
CD40P25942 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD40P25942 AP002512.4-202ENST00000641599 4530 ntBASIC4.98□□□□□ -1.61
CD40P25942 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL159987.1-201ENST00000347911 293 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL161781.1-201ENST00000354277 403 ntBASIC4.98□□□□□ -1.61
CD40P25942 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD40P25942 SNORD82-201ENST00000365530 70 ntBASIC4.98□□□□□ -1.61
CD40P25942 RNU6-178P-201ENST00000384631 104 ntBASIC4.98□□□□□ -1.61
CD40P25942 RPL7P25-201ENST00000404151 721 ntBASIC4.98□□□□□ -1.61
CD40P25942 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.98□□□□□ -1.61
CD40P25942 RPS15AP40-201ENST00000419621 391 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL590609.2-201ENST00000421430 368 ntBASIC4.98□□□□□ -1.61
CD40P25942 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AL589872.1-201ENST00000426602 288 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.98□□□□□ -1.61
CD40P25942 RPS27AP6-201ENST00000427962 448 ntBASIC4.98□□□□□ -1.61
CD40P25942 OR4F13P-201ENST00000428478 931 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL590233.1-201ENST00000430017 456 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 MTATP6P30-201ENST00000443540 664 ntBASIC4.98□□□□□ -1.61
CD40P25942 FABP3P2-201ENST00000453169 399 ntBASIC4.98□□□□□ -1.61
CD40P25942 HMGB1P15-201ENST00000453854 435 ntBASIC4.98□□□□□ -1.61
CD40P25942 RPS20P32-201ENST00000456044 356 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.98□□□□□ -1.61
CD40P25942 ATP5LP5-201ENST00000483050 299 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC093267.1-201ENST00000489176 961 ntBASIC4.98□□□□□ -1.61
CD40P25942 ARL2BPP6-201ENST00000512757 439 ntBASIC4.98□□□□□ -1.61
CD40P25942 NRON-201ENST00000517270 370 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.98□□□□□ -1.61
CD40P25942 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.98□□□□□ -1.61
CD40P25942 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AP003181.2-201ENST00000528941 181 ntBASIC4.98□□□□□ -1.61
CD40P25942 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AL049872.1-201ENST00000556323 322 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AC096996.1-201ENST00000563813 325 ntBASIC4.98□□□□□ -1.61
CD40P25942 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AC068135.2-201ENST00000569293 1028 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC034268.2-201ENST00000571784 482 ntBASIC4.98□□□□□ -1.61
CD40P25942 SNORA59B-202ENST00000578183 701 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.98□□□□□ -1.61
CD40P25942 AC018695.5-201ENST00000605872 315 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC113194.1-201ENST00000606037 500 ntBASIC4.98□□□□□ -1.61
CD40P25942 MIR6886-201ENST00000619864 61 ntBASIC4.98□□□□□ -1.61
CD40P25942 FAM157B-203ENST00000639350 358 ntBASIC4.98□□□□□ -1.61
CD40P25942 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CD40P25942 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.98□□□□□ -1.61
CD40P25942 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CD40P25942 AC097063.1-201ENST00000426714 1797 ntBASIC4.98□□□□□ -1.61
CD40P25942 AC073365.1-203ENST00000641055 1992 ntBASIC4.98□□□□□ -1.61
CD40P25942 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD40P25942 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.97□□□□□ -1.61
CD40P25942 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.97□□□□□ -1.61
CD40P25942 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD40P25942 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD40P25942 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD40P25942 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 AC022164.1-201ENST00000568767 2673 ntBASIC4.97□□□□□ -1.61
CD40P25942 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD40P25942 AC011978.2-201ENST00000569835 2054 ntBASIC4.97□□□□□ -1.61
CD40P25942 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 RNU6-867P-201ENST00000364956 107 ntBASIC4.97□□□□□ -1.61
CD40P25942 Y_RNA.372-201ENST00000365599 102 ntBASIC4.97□□□□□ -1.61
CD40P25942 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.97□□□□□ -1.61
CD40P25942 RNY3P14-201ENST00000384309 102 ntBASIC4.97□□□□□ -1.61
CD40P25942 SNORA70.9-201ENST00000384370 135 ntBASIC4.97□□□□□ -1.61
CD40P25942 U3.25-201ENST00000391209 220 ntBASIC4.97□□□□□ -1.61
CD40P25942 AL356421.1-201ENST00000403255 413 ntBASIC4.97□□□□□ -1.61
CD40P25942 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.97□□□□□ -1.61
CD40P25942 PSMA6P3-201ENST00000428242 164 ntBASIC4.97□□□□□ -1.61
CD40P25942 AL356276.2-201ENST00000435919 558 ntBASIC4.97□□□□□ -1.61
CD40P25942 SDCBPP1-201ENST00000440192 890 ntBASIC4.97□□□□□ -1.61
CD40P25942 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.97□□□□□ -1.61
CD40P25942 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD40P25942 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.97□□□□□ -1.61
CD40P25942 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.97□□□□□ -1.61
CD40P25942 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.97□□□□□ -1.61
CD40P25942 AC004129.2-201ENST00000457229 287 ntBASIC4.97□□□□□ -1.61
CD40P25942 AC013267.1-201ENST00000458227 267 ntBASIC4.97□□□□□ -1.61
CD40P25942 RPS20P21-201ENST00000466859 343 ntBASIC4.97□□□□□ -1.61
CD40P25942 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CD40P25942 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.97□□□□□ -1.61
CD40P25942 AC006539.1-201ENST00000481419 501 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms