Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.87□□□□□ -1.63
BDNFP23560 AL138799.3-201ENST00000438968 350 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.87□□□□□ -1.63
BDNFP23560 AC104651.2-201ENST00000447549 528 ntBASIC4.87□□□□□ -1.63
BDNFP23560 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 RN7SL481P-201ENST00000477764 299 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC104164.2-201ENST00000496953 495 ntBASIC4.87□□□□□ -1.63
BDNFP23560 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BDNFP23560 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.87□□□□□ -1.63
BDNFP23560 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BDNFP23560 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.87□□□□□ -1.63
BDNFP23560 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC084783.1-201ENST00000565846 910 ntBASIC4.87□□□□□ -1.63
BDNFP23560 MIR5096-201ENST00000583713 70 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.87□□□□□ -1.63
BDNFP23560 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.87□□□□□ -1.63
BDNFP23560 RPL26P30-202ENST00000602923 645 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC113368.1-201ENST00000603736 382 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AL354760.1-201ENST00000608357 643 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.87□□□□□ -1.63
BDNFP23560 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.87□□□□□ -1.63
BDNFP23560 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
BDNFP23560 ZNF37BP-203ENST00000452306 1352 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC106871.1-201ENST00000568324 3102 ntBASIC4.87□□□□□ -1.63
BDNFP23560 AC135352.1-201ENST00000506173 1418 ntBASIC4.87□□□□□ -1.63
BDNFP23560 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.87□□□□□ -1.63
BDNFP23560 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
BDNFP23560 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BDNFP23560 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BDNFP23560 AL731566.1-201ENST00000620490 1937 ntBASIC4.86□□□□□ -1.63
BDNFP23560 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
BDNFP23560 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BDNFP23560 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BDNFP23560 RNU6-115P-201ENST00000364310 107 ntBASIC4.86□□□□□ -1.63
BDNFP23560 SNORA51.2-201ENST00000364595 132 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BDNFP23560 MIR659-201ENST00000384963 97 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC244098.2-201ENST00000422068 99 ntBASIC4.86□□□□□ -1.63
BDNFP23560 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 RPS27AP7-201ENST00000422792 455 ntBASIC4.86□□□□□ -1.63
BDNFP23560 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.86□□□□□ -1.63
BDNFP23560 RPL7P59-201ENST00000447700 943 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC004022.1-201ENST00000447766 1066 ntBASIC4.86□□□□□ -1.63
BDNFP23560 RPL5P24-201ENST00000463742 885 ntBASIC4.86□□□□□ -1.63
BDNFP23560 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.86□□□□□ -1.63
BDNFP23560 SYPL1P1-201ENST00000473622 768 ntBASIC4.86□□□□□ -1.63
BDNFP23560 NCOR1P1-202ENST00000486162 291 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 OR51K1P-201ENST00000510214 950 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC048346.1-201ENST00000510247 144 ntBASIC4.86□□□□□ -1.63
BDNFP23560 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BDNFP23560 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 RNA5SP464-201ENST00000516251 108 ntBASIC4.86□□□□□ -1.63
BDNFP23560 C1GALT1P3-201ENST00000522049 819 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.86□□□□□ -1.63
BDNFP23560 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.86□□□□□ -1.63
BDNFP23560 HSPE1P14-201ENST00000605812 302 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AL133243.1-201ENST00000614487 366 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AL359757.1-201ENST00000623176 255 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC109454.4-201ENST00000623411 649 ntBASIC4.86□□□□□ -1.63
BDNFP23560 AC090506.2-201ENST00000624521 419 ntBASIC4.86□□□□□ -1.63
BDNFP23560 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 AC116096.1-201ENST00000566804 2314 ntBASIC4.86□□□□□ -1.63
BDNFP23560 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
BDNFP23560 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.86□□□□□ -1.63
BDNFP23560 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.86□□□□□ -1.63
BDNFP23560 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
BDNFP23560 AC139713.2-214ENST00000642059 1811 ntBASIC4.86□□□□□ -1.63
BDNFP23560 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BDNFP23560 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BDNFP23560 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.85□□□□□ -1.63
BDNFP23560 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
BDNFP23560 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.85□□□□□ -1.63
BDNFP23560 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BDNFP23560 RNU5B-1-201ENST00000363286 116 ntBASIC4.85□□□□□ -1.63
BDNFP23560 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
BDNFP23560 U3.22-201ENST00000391120 215 ntBASIC4.85□□□□□ -1.63
BDNFP23560 OFD1P18Y-201ENST00000420889 959 ntBASIC4.85□□□□□ -1.63
BDNFP23560 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.85□□□□□ -1.63
BDNFP23560 AC016712.1-201ENST00000431088 378 ntBASIC4.85□□□□□ -1.63
BDNFP23560 MTCYBP15-201ENST00000433123 1127 ntBASIC4.85□□□□□ -1.63
BDNFP23560 ELOCP18-201ENST00000434209 337 ntBASIC4.85□□□□□ -1.63
BDNFP23560 AC000041.1-201ENST00000439655 175 ntBASIC4.85□□□□□ -1.63
BDNFP23560 RPL23AP93-201ENST00000440847 484 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms