Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.51□□□□□ -1.85
USF1P22415 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 AC110741.2-201ENST00000605278 268 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC110792.4-201ENST00000609843 298 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC016911.1-201ENST00000613297 452 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC099669.2-201ENST00000616549 437 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC103858.2-201ENST00000621471 543 ntBASIC3.51□□□□□ -1.85
USF1P22415 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 AC090229.1-201ENST00000590983 1609 ntBASIC3.51□□□□□ -1.85
USF1P22415 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USF1P22415 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 OR11H4-201ENST00000315409 1082 ntBASIC3.5□□□□□ -1.85
USF1P22415 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.5□□□□□ -1.85
USF1P22415 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 RNA5SP246-201ENST00000458909 119 ntBASIC3.5□□□□□ -1.85
USF1P22415 AC022034.3-201ENST00000471393 478 ntBASIC3.5□□□□□ -1.85
USF1P22415 AF213884.1-201ENST00000488102 463 ntBASIC3.5□□□□□ -1.85
USF1P22415 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.5□□□□□ -1.85
USF1P22415 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.5□□□□□ -1.85
USF1P22415 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.5□□□□□ -1.85
USF1P22415 FTH1P21-201ENST00000512179 511 ntBASIC3.5□□□□□ -1.85
USF1P22415 HNRNPKP5-201ENST00000515300 253 ntBASIC3.5□□□□□ -1.85
USF1P22415 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.5□□□□□ -1.85
USF1P22415 HMGB1P46-201ENST00000520062 610 ntBASIC3.5□□□□□ -1.85
USF1P22415 AP002812.4-201ENST00000532139 286 ntBASIC3.5□□□□□ -1.85
USF1P22415 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
USF1P22415 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.5□□□□□ -1.85
USF1P22415 OR4U1P-201ENST00000554958 912 ntBASIC3.5□□□□□ -1.85
USF1P22415 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
USF1P22415 AL161713.1-201ENST00000555538 145 ntBASIC3.5□□□□□ -1.85
USF1P22415 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.5□□□□□ -1.85
USF1P22415 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.5□□□□□ -1.85
USF1P22415 MIR4458-201ENST00000578872 75 ntBASIC3.5□□□□□ -1.85
USF1P22415 AC115085.1-201ENST00000588924 229 ntBASIC3.5□□□□□ -1.85
USF1P22415 ZNF92P3-201ENST00000596594 954 ntBASIC3.5□□□□□ -1.85
USF1P22415 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USF1P22415 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USF1P22415 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USF1P22415 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
USF1P22415 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USF1P22415 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.49□□□□□ -1.85
USF1P22415 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USF1P22415 CASC19-261ENST00000641853 1638 ntBASIC3.49□□□□□ -1.85
USF1P22415 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USF1P22415 MIR200C-201ENST00000384980 68 ntBASIC3.49□□□□□ -1.85
USF1P22415 RNA5SP171-201ENST00000391071 115 ntBASIC3.49□□□□□ -1.85
USF1P22415 AL590290.1-201ENST00000405336 380 ntBASIC3.49□□□□□ -1.85
USF1P22415 Z86062.1-201ENST00000406773 777 ntBASIC3.49□□□□□ -1.85
USF1P22415 RNU4-74P-201ENST00000411280 161 ntBASIC3.49□□□□□ -1.85
USF1P22415 AL161631.1-201ENST00000417933 486 ntBASIC3.49□□□□□ -1.85
USF1P22415 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 RPEP2-201ENST00000432149 701 ntBASIC3.49□□□□□ -1.85
USF1P22415 ELOCP18-201ENST00000434209 337 ntBASIC3.49□□□□□ -1.85
USF1P22415 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.49□□□□□ -1.85
USF1P22415 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.49□□□□□ -1.85
USF1P22415 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 RRM2P4-201ENST00000441721 562 ntBASIC3.49□□□□□ -1.85
USF1P22415 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 RNU6-775P-201ENST00000459318 96 ntBASIC3.49□□□□□ -1.85
USF1P22415 RPL38P1-201ENST00000460914 211 ntBASIC3.49□□□□□ -1.85
USF1P22415 AC110792.1-201ENST00000491826 472 ntBASIC3.49□□□□□ -1.85
USF1P22415 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.49□□□□□ -1.85
USF1P22415 AC006064.5-201ENST00000541782 248 ntBASIC3.49□□□□□ -1.85
USF1P22415 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AC091515.1-201ENST00000548110 679 ntBASIC3.49□□□□□ -1.85
USF1P22415 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USF1P22415 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 AC012414.2-201ENST00000559474 187 ntBASIC3.49□□□□□ -1.85
USF1P22415 AL109741.3-201ENST00000561748 592 ntBASIC3.49□□□□□ -1.85
USF1P22415 MTND4LP24-201ENST00000572277 291 ntBASIC3.49□□□□□ -1.85
USF1P22415 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.49□□□□□ -1.85
USF1P22415 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
USF1P22415 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.49□□□□□ -1.85
USF1P22415 AP003117.1-201ENST00000602771 554 ntBASIC3.49□□□□□ -1.85
USF1P22415 AC242628.1-201ENST00000606810 391 ntBASIC3.49□□□□□ -1.85
USF1P22415 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.49□□□□□ -1.85
USF1P22415 AL031666.3-201ENST00000609320 1006 ntBASIC3.49□□□□□ -1.85
USF1P22415 MIR4727-201ENST00000622232 55 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms