Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFRAP16234 ZNF849P-201ENST00000594711 1566 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFRAP16234 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PDGFRAP16234 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDGFRAP16234 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
PDGFRAP16234 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
PDGFRAP16234 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 AL139811.1-201ENST00000424779 2299 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AL512646.1-201ENST00000269395 1077 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 SNORA70.2-201ENST00000364506 135 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AL121834.1-202ENST00000404494 277 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 HNRNPDP2-201ENST00000406475 478 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 RNA5SP36-201ENST00000410197 133 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 RN7SKP235-201ENST00000410662 305 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 RPL23AP26-201ENST00000412728 464 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.46□□□□□ -1.7
PDGFRAP16234 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 HSFY3P-201ENST00000444242 1191 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 DNAJC19P8-201ENST00000452887 259 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 MRPL35P4-201ENST00000453682 566 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 IGBP1P5-201ENST00000507524 1000 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 MTCO3P27-201ENST00000514397 196 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 RNA5SP73-201ENST00000516744 108 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AC139103.1-201ENST00000534696 1030 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AC011611.5-201ENST00000552477 578 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 PARP1P2-201ENST00000556806 195 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 AL590392.1-201ENST00000604960 446 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.46□□□□□ -1.7
PDGFRAP16234 AC092608.3-201ENST00000625017 386 ntBASIC4.46□□□□□ -1.7
PDGFRAP16234 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFRAP16234 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDGFRAP16234 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFRAP16234 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDGFRAP16234 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFRAP16234 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDGFRAP16234 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 RNU1-108P-201ENST00000362556 161 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RNU1-14P-201ENST00000362759 152 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RNU1-132P-201ENST00000364300 164 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFRAP16234 RNU6-468P-201ENST00000384003 109 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 SNORA11C-201ENST00000408532 129 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFRAP16234 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFRAP16234 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.45□□□□□ -1.7
PDGFRAP16234 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFRAP16234 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 FTH1P6-201ENST00000430768 320 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC023347.2-201ENST00000433994 462 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AC044797.1-201ENST00000445744 679 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RPS17P11-201ENST00000474297 293 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AP000926.1-201ENST00000479573 241 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AC041039.1-201ENST00000485656 536 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RPL35P6-201ENST00000490024 372 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 RN7SL691P-201ENST00000494487 301 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AL592156.1-201ENST00000508758 304 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFRAP16234 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC069304.3-201ENST00000603938 1084 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AL139286.1-201ENST00000604465 483 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AL392112.1-201ENST00000605115 829 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 MIR6716-201ENST00000613413 80 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AC004825.2-201ENST00000616634 455 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 AC018926.3-201ENST00000618841 406 ntBASIC4.45□□□□□ -1.7
PDGFRAP16234 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms