Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
TOP2AP11388 MIR93-201ENST00000385024 80 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 RNA5SP229-201ENST00000410809 99 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP2AP11388 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.03□□□□□ -1.44
TOP2AP11388 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.03□□□□□ -1.44
TOP2AP11388 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.03□□□□□ -1.44
TOP2AP11388 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP2AP11388 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP2AP11388 RPL21P6-201ENST00000479171 504 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 AC139783.2-201ENST00000504847 1145 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 RNA5SP341-201ENST00000516261 117 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.03□□□□□ -1.44
TOP2AP11388 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.03□□□□□ -1.44
TOP2AP11388 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOP2AP11388 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP2AP11388 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TOP2AP11388 AC119744.1-201ENST00000454746 1715 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
TOP2AP11388 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.02□□□□□ -1.45
TOP2AP11388 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TOP2AP11388 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
TOP2AP11388 SNORD74.4-201ENST00000364129 80 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 U3.26-201ENST00000391236 204 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 AL136131.1-201ENST00000406079 803 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.02□□□□□ -1.45
TOP2AP11388 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.02□□□□□ -1.45
TOP2AP11388 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.02□□□□□ -1.45
TOP2AP11388 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.02□□□□□ -1.45
TOP2AP11388 AC022149.2-201ENST00000621061 203 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 MIR6852-201ENST00000621699 66 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOP2AP11388 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP2AP11388 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP2AP11388 AC139713.2-215ENST00000641428 5037 ntBASIC6.02□□□□□ -1.45
TOP2AP11388 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP2AP11388 TNPO1P3-201ENST00000436471 2662 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TOP2AP11388 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP2AP11388 RPL12P18-201ENST00000437175 325 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 ANP32BP2-201ENST00000454525 545 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 AC025445.1-201ENST00000502728 300 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 AC110794.1-201ENST00000505816 425 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 BTF3L4P4-201ENST00000506381 449 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.01□□□□□ -1.45
TOP2AP11388 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.01□□□□□ -1.45
TOP2AP11388 AC015802.5-201ENST00000607478 399 ntBASIC6.01□□□□□ -1.45
TOP2AP11388 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.01□□□□□ -1.45
TOP2AP11388 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.01□□□□□ -1.45
TOP2AP11388 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP2AP11388 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6□□□□□ -1.45
TOP2AP11388 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6□□□□□ -1.45
TOP2AP11388 RPS26P15-201ENST00000488067 348 ntBASIC6□□□□□ -1.45
TOP2AP11388 Vault.1-201ENST00000516474 102 ntBASIC6□□□□□ -1.45
TOP2AP11388 RN7SKP83-201ENST00000516512 178 ntBASIC6□□□□□ -1.45
TOP2AP11388 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6□□□□□ -1.45
TOP2AP11388 AP000926.4-201ENST00000527351 454 ntBASIC6□□□□□ -1.45
TOP2AP11388 AC020914.4-201ENST00000597690 277 ntBASIC6□□□□□ -1.45
TOP2AP11388 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC6□□□□□ -1.45
TOP2AP11388 OR51C1P-202ENST00000641159 1444 ntBASIC6□□□□□ -1.45
TOP2AP11388 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP2AP11388 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP2AP11388 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP2AP11388 RNU1-18P-201ENST00000363062 164 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 TAF9BP1-201ENST00000396646 746 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 JKAMPP1-201ENST00000413804 919 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 ATP5C1P1-201ENST00000441945 895 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 S100A11P2-201ENST00000467589 312 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 AC022795.1-201ENST00000473808 480 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 HMGB3P14-201ENST00000494195 599 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TOP2AP11388 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.99□□□□□ -1.45
TOP2AP11388 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP2AP11388 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.99□□□□□ -1.45
TOP2AP11388 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP2AP11388 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP2AP11388 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TOP2AP11388 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TOP2AP11388 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP2AP11388 AC004069.2-201ENST00000505438 1114 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP2AP11388 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP2AP11388 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP2AP11388 AC138932.5-201ENST00000617759 563 ntBASIC5.99□□□□□ -1.45
TOP2AP11388 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TOP2AP11388 HSPA8P19-201ENST00000505359 1517 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TOP2AP11388 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 RNU1-70P-201ENST00000362618 164 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 RNU6-283P-201ENST00000364788 107 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 AC096576.1-201ENST00000489014 359 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 AC005798.1-201ENST00000513715 387 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms