Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.87□□□□□ -1.47
HMGB1P09429 MIR4509-2-201ENST00000583920 94 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB1P09429 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB1P09429 AC103881.1-201ENST00000603476 538 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 AC128687.1-201ENST00000605304 619 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB1P09429 AC093799.2-201ENST00000610062 578 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 AC024257.5-201ENST00000612739 531 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 MIR4509-1-201ENST00000618224 94 ntBASIC5.87□□□□□ -1.47
HMGB1P09429 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB1P09429 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB1P09429 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB1P09429 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB1P09429 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC095050.2-201ENST00000510748 1458 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 CIR1P2-201ENST00000514821 1342 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 DDX18P5-201ENST00000534547 1306 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 U8.4-201ENST00000363626 134 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 RN7SKP269-201ENST00000365545 319 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 VN1R51P-201ENST00000411675 945 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AIMP1P1-201ENST00000418670 937 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 AC092162.1-201ENST00000432828 434 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 RPL7P61-201ENST00000451721 751 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 BX284632.1-201ENST00000478218 541 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 RN7SL97P-201ENST00000486780 299 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGB1P09429 SNORA31.20-201ENST00000517111 133 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AC027308.1-201ENST00000517993 110 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 OR10V3P-201ENST00000525712 725 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB1P09429 RFPL1S-203ENST00000539579 330 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 BNIP3P1-201ENST00000547295 580 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB1P09429 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 XIAPP1-201ENST00000603162 600 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AC021749.1-201ENST00000604322 607 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 AC019206.1-201ENST00000621938 425 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 AL353662.3-201ENST00000625131 237 ntBASIC5.86□□□□□ -1.47
HMGB1P09429 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB1P09429 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HMGB1P09429 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 AC139713.2-214ENST00000642059 1811 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 MTCO1P23-201ENST00000415223 1526 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGB1P09429 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGB1P09429 RNA5SP428-201ENST00000365129 132 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGB1P09429 SNORA51.8-201ENST00000384234 132 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 RN7SKP229-201ENST00000410465 302 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 CTSL3P-202ENST00000412179 788 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 CRYBB2P1-203ENST00000415709 538 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 TMBIM7P-201ENST00000418074 855 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 AL592293.2-201ENST00000422292 996 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB1P09429 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 EEF1B2P5-201ENST00000444820 548 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 AC005532.2-201ENST00000467154 373 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB1P09429 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB1P09429 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB1P09429 AC026412.2-201ENST00000512270 1075 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 AC004980.4-201ENST00000513375 203 ntBASIC5.85□□□□□ -1.47
HMGB1P09429 RNU6-1225P-201ENST00000516336 65 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms