Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 HMGN1P24-201ENST00000412282 298 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.15□□□□□ -2.07
APOBP04114 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC108734.1-201ENST00000439549 399 ntBASIC2.15□□□□□ -2.07
APOBP04114 AP000916.1-201ENST00000533869 835 ntBASIC2.15□□□□□ -2.07
APOBP04114 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 ASNSP3-201ENST00000451989 1306 ntBASIC2.15□□□□□ -2.07
APOBP04114 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
APOBP04114 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
APOBP04114 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
APOBP04114 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.15□□□□□ -2.07
APOBP04114 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
APOBP04114 DDX6P1-205ENST00000441966 1436 ntBASIC2.15□□□□□ -2.07
APOBP04114 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.15□□□□□ -2.07
APOBP04114 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 AL357075.1-201ENST00000404107 726 ntBASIC2.15□□□□□ -2.07
APOBP04114 RPS29P31-201ENST00000446147 164 ntBASIC2.15□□□□□ -2.07
APOBP04114 RAB28P3-201ENST00000448325 597 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.15□□□□□ -2.07
APOBP04114 MIR2682-201ENST00000580305 110 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC068020.1-201ENST00000594215 661 ntBASIC2.15□□□□□ -2.07
APOBP04114 AP003392.5-201ENST00000607857 415 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC105227.2-201ENST00000615075 605 ntBASIC2.15□□□□□ -2.07
APOBP04114 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
APOBP04114 USP8P1-201ENST00000494673 3183 ntBASIC2.15□□□□□ -2.07
APOBP04114 ZNF90P1-201ENST00000480493 1951 ntBASIC2.14□□□□□ -2.07
APOBP04114 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 MIR422A-201ENST00000362286 90 ntBASIC2.14□□□□□ -2.07
APOBP04114 AL139132.1-201ENST00000431587 344 ntBASIC2.14□□□□□ -2.07
APOBP04114 BX119904.1-201ENST00000432026 348 ntBASIC2.14□□□□□ -2.07
APOBP04114 ARL4AP3-201ENST00000441452 574 ntBASIC2.14□□□□□ -2.07
APOBP04114 YWHAQP9-201ENST00000445891 512 ntBASIC2.14□□□□□ -2.07
APOBP04114 Y_RNA.638-201ENST00000459374 113 ntBASIC2.14□□□□□ -2.07
APOBP04114 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.14□□□□□ -2.07
APOBP04114 AC069209.1-201ENST00000619282 651 ntBASIC2.14□□□□□ -2.07
APOBP04114 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
APOBP04114 OR51C1P-202ENST00000641159 1444 ntBASIC2.14□□□□□ -2.07
APOBP04114 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 TNPO1P3-201ENST00000436471 2662 ntBASIC2.14□□□□□ -2.07
APOBP04114 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.14□□□□□ -2.07
APOBP04114 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 RN7SL585P-201ENST00000470538 280 ntBASIC2.14□□□□□ -2.07
APOBP04114 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 AC138965.3-201ENST00000623875 498 ntBASIC2.14□□□□□ -2.07
APOBP04114 SAGE2P-201ENST00000420011 2126 ntBASIC2.14□□□□□ -2.07
APOBP04114 RPL7AP73-201ENST00000413490 353 ntBASIC2.14□□□□□ -2.07
APOBP04114 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 MOB1AP1-201ENST00000430903 535 ntBASIC2.14□□□□□ -2.07
APOBP04114 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 AL135938.1-201ENST00000443141 297 ntBASIC2.14□□□□□ -2.07
APOBP04114 AC010095.1-201ENST00000443543 144 ntBASIC2.14□□□□□ -2.07
APOBP04114 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.14□□□□□ -2.07
APOBP04114 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
APOBP04114 AL645568.2-201ENST00000432815 1337 ntBASIC2.14□□□□□ -2.07
APOBP04114 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOBP04114 AC006504.1-201ENST00000562493 3666 ntBASIC2.13□□□□□ -2.07
APOBP04114 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
APOBP04114 ATP5HP2-201ENST00000433885 485 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 SEPT14P1-201ENST00000458703 648 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC093755.1-201ENST00000512950 1023 ntBASIC2.13□□□□□ -2.07
APOBP04114 DUXAP6-201ENST00000553858 601 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC004832.5-201ENST00000608677 401 ntBASIC2.13□□□□□ -2.07
APOBP04114 AL356489.2-201ENST00000566968 3528 ntBASIC2.13□□□□□ -2.07
APOBP04114 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
APOBP04114 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 RPL7P47-201ENST00000497299 556 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms