Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 SNORA58B-201ENST00000364259 136 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 SNORA27.3-201ENST00000364937 134 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 MIR192-201ENST00000384915 110 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 MIR323B-201ENST00000385269 82 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 RNA5SP239-201ENST00000410218 129 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 GTF2IP23-201ENST00000423746 351 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 YY1P1-201ENST00000427625 668 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 HMGB3P5-201ENST00000428894 612 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 PPIAP21-201ENST00000464473 501 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC011276.1-201ENST00000469688 323 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL049830.2-201ENST00000480072 201 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 METTL15P1-201ENST00000481421 1045 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 RPL23AP44-201ENST00000482216 473 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC013356.1-201ENST00000489027 564 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC231760.1-201ENST00000498002 260 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC108157.1-201ENST00000510511 539 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC108120.2-201ENST00000512973 294 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 IGKV2-23-201ENST00000518729 323 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 HIGD1AP18-201ENST00000520730 278 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 YPEL5P3-201ENST00000547227 352 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC006116.5-201ENST00000591936 559 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC005229.3-201ENST00000603438 323 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC115621.1-201ENST00000604653 858 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL356218.2-201ENST00000605264 187 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 Mico1.1-201ENST00000611698 204 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC017002.4-201ENST00000604721 1525 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 AC139713.2-214ENST00000642059 1811 ntBASIC3.28□□□□□ -1.88
HLA-DQB1P01920 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 OR5T3-201ENST00000303059 1023 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 RNA5SP509-201ENST00000364577 119 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 RNU6-244P-201ENST00000391028 104 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 SKINT1L-201ENST00000401057 817 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 RPS27AP11-201ENST00000402798 447 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 OR5BE1P-201ENST00000425977 939 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AL732292.1-201ENST00000426692 226 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC114878.1-201ENST00000441166 358 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 MTND2P3-201ENST00000452458 470 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC021205.1-201ENST00000468797 348 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC108475.1-201ENST00000507880 950 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 HMGB1P47-201ENST00000511281 589 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 OR4A12P-201ENST00000530847 918 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC008011.1-201ENST00000545989 227 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC068714.1-201ENST00000559623 800 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 SS18L2P2-201ENST00000583960 235 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 MTCO3P22-201ENST00000603219 784 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC242628.1-201ENST00000606810 391 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB1P01920 OR6R2P-201ENST00000609216 300 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 MIR8059-201ENST00000620427 81 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC018816.2-201ENST00000621460 353 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC000123.2-201ENST00000623124 461 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 MIR3653-201ENST00000625572 110 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AL355480.1-201ENST00000629041 99 ntBASIC3.27□□□□□ -1.89
HLA-DQB1P01920 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms