Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN1O60741 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN1O60741 AC099669.2-201ENST00000616549 437 ntBASIC3.88□□□□□ -1.79
HCN1O60741 ZYXP1-201ENST00000617638 118 ntBASIC3.88□□□□□ -1.79
HCN1O60741 AL645927.2-201ENST00000618350 349 ntBASIC3.88□□□□□ -1.79
HCN1O60741 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN1O60741 C2orf27A-204ENST00000623058 969 ntBASIC3.88□□□□□ -1.79
HCN1O60741 AC090617.9-201ENST00000623751 147 ntBASIC3.88□□□□□ -1.79
HCN1O60741 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN1O60741 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN1O60741 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN1O60741 RNF6P1-201ENST00000444889 1784 ntBASIC3.88□□□□□ -1.79
HCN1O60741 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN1O60741 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN1O60741 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN1O60741 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN1O60741 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HCN1O60741 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
HCN1O60741 MIR1193-201ENST00000408109 78 ntBASIC3.87□□□□□ -1.79
HCN1O60741 SNORA11-201ENST00000408789 128 ntBASIC3.87□□□□□ -1.79
HCN1O60741 RN7SKP235-201ENST00000410662 305 ntBASIC3.87□□□□□ -1.79
HCN1O60741 NRBF2P2-201ENST00000413087 861 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC105402.1-201ENST00000413336 545 ntBASIC3.87□□□□□ -1.79
HCN1O60741 MTND4P11-201ENST00000417020 1058 ntBASIC3.87□□□□□ -1.79
HCN1O60741 MFSD13B-201ENST00000420133 1290 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HCN1O60741 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AL513321.1-201ENST00000441175 761 ntBASIC3.87□□□□□ -1.79
HCN1O60741 RPL34P26-201ENST00000445636 354 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN1O60741 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 RAD23BP3-201ENST00000454157 1152 ntBASIC3.87□□□□□ -1.79
HCN1O60741 RPS27AP13-201ENST00000498403 237 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC020593.1-201ENST00000507399 299 ntBASIC3.87□□□□□ -1.79
HCN1O60741 SETP12-201ENST00000514068 805 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC099522.1-202ENST00000514718 367 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN1O60741 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN1O60741 AC093014.1-201ENST00000548926 724 ntBASIC3.87□□□□□ -1.79
HCN1O60741 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
HCN1O60741 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.87□□□□□ -1.79
HCN1O60741 AL109741.3-201ENST00000561748 592 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN1O60741 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC006116.5-201ENST00000591936 559 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AC005255.1-201ENST00000593748 216 ntBASIC3.87□□□□□ -1.79
HCN1O60741 AL161729.3-201ENST00000603533 673 ntBASIC3.87□□□□□ -1.79
HCN1O60741 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 AC110792.4-201ENST00000609843 298 ntBASIC3.87□□□□□ -1.79
HCN1O60741 uc_338.32-201ENST00000615087 172 ntBASIC3.87□□□□□ -1.79
HCN1O60741 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 AL713922.2-201ENST00000619384 716 ntBASIC3.87□□□□□ -1.79
HCN1O60741 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN1O60741 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN1O60741 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN1O60741 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 AC095050.2-201ENST00000510748 1458 ntBASIC3.86□□□□□ -1.79
HCN1O60741 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN1O60741 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN1O60741 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN1O60741 SNORA57.1-201ENST00000391227 145 ntBASIC3.86□□□□□ -1.79
HCN1O60741 RNA5SP36-201ENST00000410197 133 ntBASIC3.86□□□□□ -1.79
HCN1O60741 RN7SKP182-201ENST00000410772 298 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AC108032.1-201ENST00000416706 207 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 AC114814.2-201ENST00000419195 485 ntBASIC3.86□□□□□ -1.79
HCN1O60741 RPL7P53-201ENST00000421245 739 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AL031663.1-201ENST00000437445 219 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN1O60741 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN1O60741 HSFY6P-201ENST00000445573 403 ntBASIC3.86□□□□□ -1.79
HCN1O60741 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN1O60741 RPL5P32-201ENST00000454085 879 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
HCN1O60741 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN1O60741 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN1O60741 BNIP3P41-201ENST00000503774 571 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HCN1O60741 AC109458.1-201ENST00000508858 316 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.86□□□□□ -1.79
HCN1O60741 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN1O60741 RFPL1S-203ENST00000539579 330 ntBASIC3.86□□□□□ -1.79
HCN1O60741 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN1O60741 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.86□□□□□ -1.79
HCN1O60741 OR4U1P-201ENST00000554958 912 ntBASIC3.86□□□□□ -1.79
HCN1O60741 LINC00557-201ENST00000563184 1279 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AP001180.3-201ENST00000582221 145 ntBASIC3.86□□□□□ -1.79
HCN1O60741 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN1O60741 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms