Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 VN1R90P-201ENST00000595717 726 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC105129.3-201ENST00000605455 485 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC000367.1-201ENST00000452711 1766 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 METTL21EP-201ENST00000298105 713 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LMX1BO60663 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 RNU4-44P-201ENST00000363050 141 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 AL049693.1-201ENST00000402760 611 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 VTA1P1-201ENST00000414044 866 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 TCEA1P4-201ENST00000415066 844 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 BX510359.2-201ENST00000417920 305 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 Z74021.1-201ENST00000423610 407 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 CENPIP1-201ENST00000425713 902 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 NRBF2P3-201ENST00000432731 865 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC092170.1-201ENST00000440211 356 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 AL589765.3-201ENST00000446084 462 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AC239798.3-201ENST00000454459 408 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AURKAPS2-201ENST00000454983 333 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 MTCO2P18-201ENST00000457151 658 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC011979.1-201ENST00000472300 483 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 MTND4P2-201ENST00000507767 1203 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 XKRY-201ENST00000510392 1100 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 RFPL4AP5-201ENST00000514977 504 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 DUXAP1-201ENST00000556632 463 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.09□□□□□ -1.75
LMX1BO60663 AADACP1-206ENST00000561502 1193 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 ATP5F1P7-201ENST00000567330 760 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AP001981.2-201ENST00000603241 418 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 SNORD91B-202ENST00000608459 222 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 AL139418.1-201ENST00000613613 177 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AL354976.1-201ENST00000613843 387 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.09□□□□□ -1.75
LMX1BO60663 ZNF542P-204ENST00000482727 1305 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 BTBD10P1-201ENST00000549824 1352 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 AP000526.1-201ENST00000603308 1388 ntBASIC4.09□□□□□ -1.75
LMX1BO60663 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMX1BO60663 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LMX1BO60663 AC073055.1-201ENST00000456901 1621 ntBASIC4.09□□□□□ -1.76
LMX1BO60663 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LMX1BO60663 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.09□□□□□ -1.76
LMX1BO60663 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LMX1BO60663 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMX1BO60663 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMX1BO60663 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.08□□□□□ -1.76
LMX1BO60663 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMX1BO60663 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMX1BO60663 OR4K15-201ENST00000305051 1216 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 ENSAP3-201ENST00000312710 333 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LMX1BO60663 Y_RNA.192-201ENST00000363977 102 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 MIR195-201ENST00000385194 87 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 AL590762.2-201ENST00000395798 571 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 AL021407.1-201ENST00000404531 386 ntBASIC4.08□□□□□ -1.76
LMX1BO60663 Y_RNA.599-201ENST00000410489 109 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms