Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSSCA1O60232 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSSCA1O60232 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSSCA1O60232 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSSCA1O60232 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.86□□□□□ -1.95
SSSCA1O60232 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.86□□□□□ -1.95
SSSCA1O60232 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 U3.15-201ENST00000365398 212 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 RNU6-805P-201ENST00000365643 106 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 SDCBPP2-201ENST00000424643 885 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AL353093.1-201ENST00000441292 436 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 EIF2S2P2-201ENST00000447161 982 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC125238.1-201ENST00000448842 249 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 HMGB3P21-201ENST00000452483 547 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AL354710.1-201ENST00000453641 246 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 RPL23AP67-201ENST00000465341 474 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC006463.2-201ENST00000473326 348 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 TXNP6-201ENST00000510190 310 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.86□□□□□ -1.95
SSSCA1O60232 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.86□□□□□ -1.95
SSSCA1O60232 SNORD116-26-201ENST00000516006 96 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 SNORA64.4-201ENST00000516632 81 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 MIR2276-201ENST00000516886 89 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 SCARNA14-201ENST00000516903 136 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 RNU6-352P-201ENST00000516908 107 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 RN7SKP289-201ENST00000517244 295 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC006518.1-201ENST00000541449 943 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.86□□□□□ -1.95
SSSCA1O60232 MIR3186-201ENST00000577404 85 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AC234771.5-201ENST00000600161 514 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.86□□□□□ -1.95
SSSCA1O60232 AL021707.7-201ENST00000607991 416 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 AC004972.1-201ENST00000623934 2209 ntBASIC2.86□□□□□ -1.95
SSSCA1O60232 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SSSCA1O60232 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSSCA1O60232 CCT8P1-201ENST00000413611 1657 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.85□□□□□ -1.95
SSSCA1O60232 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 SNORA73.2-201ENST00000364946 201 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SSSCA1O60232 SNORA3.3-201ENST00000408712 125 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AL356095.1-201ENST00000417217 199 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.85□□□□□ -1.95
SSSCA1O60232 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 MTND2P2-201ENST00000434633 945 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.85□□□□□ -1.95
SSSCA1O60232 UBDP1-202ENST00000457888 382 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 RN7SL594P-201ENST00000470590 287 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC006511.1-201ENST00000470614 315 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 RN7SL323P-201ENST00000494712 295 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 SETP14-201ENST00000497538 873 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.85□□□□□ -1.95
SSSCA1O60232 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC114967.1-201ENST00000504890 259 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC009643.1-201ENST00000532030 391 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.85□□□□□ -1.95
SSSCA1O60232 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.85□□□□□ -1.95
SSSCA1O60232 MIR4458-201ENST00000578872 75 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 MIR5096-201ENST00000583713 70 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC090953.1-201ENST00000604305 1092 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 MIR6867-201ENST00000610636 67 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC012531.5-201ENST00000611375 151 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AL450489.1-201ENST00000612071 468 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC018816.2-201ENST00000621460 353 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AP003355.3-201ENST00000623465 114 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.85□□□□□ -1.95
SSSCA1O60232 AC007823.1-201ENST00000569932 1566 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SSSCA1O60232 SEPT7P7-201ENST00000420492 1301 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 AC090229.1-201ENST00000590983 1609 ntBASIC2.85□□□□□ -1.95
SSSCA1O60232 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSSCA1O60232 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC012618.3-205ENST00000637896 1496 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms