Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RN7SKP283-201ENST00000517197 270 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC090281.1-201ENST00000523019 276 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC074029.1-201ENST00000552531 1044 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 MTATP6P2-201ENST00000603319 678 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC114781.5-201ENST00000615297 108 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC073569.3-201ENST00000619055 682 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AL592494.2-201ENST00000425455 1548 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC119744.1-201ENST00000454746 1715 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AL512646.1-201ENST00000269395 1077 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 OR6C69P-201ENST00000394268 893 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 BX664727.1-201ENST00000416024 466 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC234779.1-201ENST00000425910 285 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC092809.1-201ENST00000441469 474 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC015908.1-201ENST00000478739 476 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC092902.1-201ENST00000486999 259 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC016550.1-201ENST00000505348 785 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC121161.1-201ENST00000510606 652 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 PPBPP1-201ENST00000510807 373 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC090819.1-201ENST00000523800 1111 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 C1DP5-201ENST00000525775 383 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AP000916.1-201ENST00000533869 835 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 PSMB7P1-201ENST00000556349 514 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 MTND6P33-201ENST00000571794 183 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AL121834.1-201ENST00000572284 509 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC136624.4-201ENST00000573044 370 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 TMF1P1-201ENST00000576058 373 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 MIR3138-201ENST00000585238 82 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC067852.4-201ENST00000590314 478 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 MIR6716-201ENST00000613413 80 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC026368.1-201ENST00000614934 690 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC253576.2-201ENST00000618815 580 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AC138907.10-201ENST00000623708 983 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AP002371.2-201ENST00000624450 503 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 AP003400.6-201ENST00000624698 740 ntBASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4BQ9Y4P1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RNU1-108P-201ENST00000362556 161 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RPL23AP48-201ENST00000406913 488 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms