Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 MIR1271-201ENST00000408537 86 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RPS24P8-201ENST00000431490 402 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 AL353093.1-201ENST00000441292 436 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RNFT1P2-201ENST00000443064 757 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 AC069540.1-201ENST00000446320 988 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RPL36AP13-201ENST00000457490 317 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RNU6-1218P-201ENST00000458990 108 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 METTL15P1-201ENST00000481421 1045 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 MIR4472-2-201ENST00000582069 67 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 AC055764.2-201ENST00000610089 670 ntBASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 RNU6-792P-201ENST00000363490 107 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 RPL7P9-201ENST00000468715 747 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 YPEL5P3-201ENST00000547227 352 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 POLR2KP1-201ENST00000553226 168 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 VN1R84P-201ENST00000593697 235 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 MIR6868-201ENST00000611215 58 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 FP236240.3-201ENST00000623061 327 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 MIR3651-201ENST00000630427 90 ntBASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM4Q9ULL8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 RNU6-317P-201ENST00000384031 107 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 MIR195-201ENST00000385194 87 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AL161631.1-201ENST00000417933 486 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AL358472.1-201ENST00000431295 329 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AP000949.1-201ENST00000438328 629 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC097499.1-201ENST00000444277 208 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AL049829.1-201ENST00000465411 156 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 TRAPPC2P2-201ENST00000517589 409 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC092451.2-201ENST00000538746 658 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC110743.1-201ENST00000584870 478 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC116447.1-201ENST00000613153 453 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC140113.4-201ENST00000622087 222 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 GTF2H2B-203ENST00000508065 1432 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 AC006484.1-201ENST00000435086 1884 ntBASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM4Q9ULL8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
SHROOM4Q9ULL8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC7.71□□□□□ -1.17
SHROOM4Q9ULL8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.17
SHROOM4Q9ULL8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC096656.1-201ENST00000623826 1364 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 MAPK10-320ENST00000641462 6696 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 MIR16-2-201ENST00000362117 81 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 MOB1AP2-201ENST00000446060 614 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 RPL7P1-201ENST00000468161 747 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC106782.4-201ENST00000568264 210 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC092574.1-201ENST00000609771 420 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AC064801.1-201ENST00000612025 407 ntBASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM4Q9ULL8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC067945.1-201ENST00000342609 618 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 SNORA62.2-201ENST00000364672 152 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC093719.1-202ENST00000392735 373 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 RNU2-65P-201ENST00000410162 185 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 ELOCP10-201ENST00000440624 327 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 OR9M1P-201ENST00000459641 921 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms