Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC090229.1-201ENST00000590983 1609 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 RN7SKP44-201ENST00000363602 316 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 SNORA70.4-201ENST00000365509 134 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 MIR200C-201ENST00000384980 68 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 RPS11P1-201ENST00000451072 473 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AP005901.4-201ENST00000577336 569 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AL451086.1-201ENST00000605596 223 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 RPL23AP61-201ENST00000623642 466 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AL118496.1-201ENST00000440201 1812 ntBASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTNNA3Q9UI47 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 RNU6ATAC-201ENST00000408749 126 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AL691449.1-201ENST00000426570 421 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 MTCO1P45-201ENST00000431457 267 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 TPTE2P3-201ENST00000441562 1189 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 RRM2P4-201ENST00000441721 562 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 RPL21P89-201ENST00000444021 467 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AL645939.1-201ENST00000453429 797 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 HMGN1P8-201ENST00000463578 288 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC006511.1-201ENST00000470614 315 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC110792.1-201ENST00000491826 472 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 RPL31P61-201ENST00000496160 376 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 PNPT1P2-201ENST00000456768 2050 ntBASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNNA3Q9UI47 LINC02471-203ENST00000641941 4752 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 MIR372-201ENST00000362225 67 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RNU6-666P-201ENST00000363499 107 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RNA5SP399-201ENST00000364003 117 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RPL21P65-201ENST00000406094 466 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RNU4-6P-201ENST00000410804 122 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 CYCSP19-201ENST00000411715 316 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 FTH1P6-201ENST00000430768 320 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 BTG3P1-201ENST00000435859 716 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 HMGB1P37-201ENST00000439613 609 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 VN1R48P-201ENST00000448149 1036 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC091564.1-201ENST00000464563 479 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 RPL23AP12-201ENST00000467573 473 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 CDH12P2-201ENST00000504393 298 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC138473.1-201ENST00000605717 526 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 CDRT1-208ENST00000630868 794 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC096656.1-201ENST00000623826 1364 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 AC007529.1-201ENST00000418574 2178 ntBASIC4.74□□□□□ -1.65
CTNNA3Q9UI47 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms