Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL359643.1-201ENST00000404109 423 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC069218.2-201ENST00000411665 344 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RPS17P17-201ENST00000419392 409 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RPL17P17-201ENST00000419491 557 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RPL7L1P10-201ENST00000427790 463 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 FABP5P14-201ENST00000437273 393 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 COX4I1P2-201ENST00000447446 547 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CBX1P2-201ENST00000453841 458 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 SETP20-201ENST00000457046 852 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC006511.1-201ENST00000470614 315 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 MTND4LP22-201ENST00000508209 276 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RNU6-1088P-201ENST00000516850 104 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 MYL12AP1-201ENST00000518490 515 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 OR4P1P-201ENST00000530808 1136 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC069061.3-201ENST00000582254 823 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 BNIP3P25-201ENST00000596023 559 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AL136984.1-201ENST00000607611 1893 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AC083806.3-201ENST00000614016 455 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AL157817.1-201ENST00000614264 790 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AP001486.3-201ENST00000615334 372 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIMD1Q9UGP4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 MTND5P19-201ENST00000424872 1794 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 Y_RNA.149-201ENST00000363558 117 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RNU1-84P-201ENST00000365447 164 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RNU6-1226P-201ENST00000384317 107 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC004386.1-201ENST00000393214 761 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RNU6-985P-201ENST00000410182 104 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC239367.3-201ENST00000428996 814 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AL359265.2-201ENST00000434367 631 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RPL36AP6-201ENST00000435770 321 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 PRPF38AP2-201ENST00000438179 851 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RPL5P7-201ENST00000444235 813 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RN7SL254P-201ENST00000460609 284 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC017037.2-201ENST00000513850 890 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RNU6-273P-201ENST00000516937 96 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 RN7SKP295-201ENST00000517264 153 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC078899.1-201ENST00000521432 1185 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 OR5D15P-201ENST00000531671 942 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AP000763.2-201ENST00000540641 163 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC008782.1-201ENST00000603386 430 ntBASIC6.96□□□□□ -1.3
LIMD1Q9UGP4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms