Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AP003392.5-201ENST00000607857 415 ntBASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 ZYXP1-201ENST00000617638 118 ntBASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 CR392039.4-201ENST00000624968 501 ntBASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCSER1Q9C0I3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 RNF6P1-201ENST00000444889 1784 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC006042.3-201ENST00000454684 1469 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 SNORD115-48-201ENST00000364764 76 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 RPL7AP73-201ENST00000413490 353 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC092647.1-201ENST00000420654 287 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 YWHAEP5-201ENST00000431545 765 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC096638.2-201ENST00000434965 711 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 TBCAP1-201ENST00000436520 327 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL451050.1-201ENST00000450126 415 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 CBX3P2-202ENST00000583365 535 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC005242.1-201ENST00000585658 438 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 GTF2H2B-203ENST00000508065 1432 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 OR11H5P-202ENST00000641612 1325 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 Z82217.1-201ENST00000625157 8149 ntBASIC4.46□□□□□ -1.7
CCSER1Q9C0I3 AC018555.1-201ENST00000567548 1980 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 BDP1P-201ENST00000582658 1990 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 PPIAP31-201ENST00000405422 495 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 RPL7P31-201ENST00000450192 724 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AL121877.1-201ENST00000453704 622 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AL672167.3-201ENST00000465951 960 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AL161747.1-201ENST00000480068 358 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 SYT14P1-201ENST00000481459 721 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC104687.1-201ENST00000485829 412 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC087369.1-201ENST00000520775 996 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AP002812.4-201ENST00000532139 286 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 NOP56P3-201ENST00000549457 385 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC010680.3-201ENST00000604215 520 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 AC067959.1-201ENST00000604334 379 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 RNU4-89P-201ENST00000607443 133 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 MFSD8-220ENST00000641243 1422 ntBASIC4.45□□□□□ -1.7
CCSER1Q9C0I3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 AC009501.3-201ENST00000605001 1352 ntBASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 RN7SKP263-201ENST00000411194 309 ntBASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 CR848007.2-201ENST00000424918 787 ntBASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 AC087650.1-201ENST00000431445 468 ntBASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.44□□□□□ -1.7
CCSER1Q9C0I3 MTND2P8-201ENST00000450555 1025 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms