Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR5187-201ENST00000583479 76 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC073869.7-201ENST00000640874 297 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 AC004944.1-201ENST00000517807 3059 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 SMC4P1-201ENST00000414479 527 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 AC245054.1-201ENST00000420944 258 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 CYCSP35-201ENST00000451978 304 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 AC006946.3-201ENST00000609791 756 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 MTND5P12-201ENST00000502851 1449 ntBASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM3Q8TF72 MTCO1P46-201ENST00000451639 1491 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 VN1R51P-201ENST00000411675 945 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC020914.6-201ENST00000594327 272 ntBASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.78□□□□□ -1.8
SHROOM3Q8TF72 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
SHROOM3Q8TF72 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.78□□□□□ -1.81
SHROOM3Q8TF72 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 GNG5P1-201ENST00000255500 204 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 HLFP1-201ENST00000402375 499 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AP000563.1-201ENST00000490865 758 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 UBA52P3-201ENST00000491303 382 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 PRELID3BP6-201ENST00000503839 571 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 NARSP2-201ENST00000518524 679 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 RMST_9.1-201ENST00000619945 193 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 AC074029.4-201ENST00000624796 1859 ntBASIC3.77□□□□□ -1.81
SHROOM3Q8TF72 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 RNA5SP197-201ENST00000363357 119 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 MIR1289-1-201ENST00000408836 144 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 RPL12P46-201ENST00000436610 195 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC017015.1-201ENST00000477387 286 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 WBP1LP4-201ENST00000505043 344 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC110801.1-201ENST00000623590 212 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AL359757.2-201ENST00000624309 274 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHROOM3Q8TF72 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms