Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MTCYBP3-201ENST00000445588 1137 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 YWHAQP9-201ENST00000445891 512 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RFC5P1-201ENST00000454419 874 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RPL23AP24-201ENST00000458203 385 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 snoU13.24-201ENST00000458998 104 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MTND4LP3-201ENST00000468320 276 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RPL23AP71-201ENST00000470966 469 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RAP1BP2-201ENST00000478270 544 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 OR2A20P-203ENST00000498397 1268 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 SCARNA22-201ENST00000503991 125 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MTCYBP16-201ENST00000509187 1129 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 Y_RNA.655-201ENST00000515919 96 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MRPL49P2-201ENST00000521066 465 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 COX6B1P6-201ENST00000522347 255 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MTCYBP28-201ENST00000566728 1132 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AP005136.1-201ENST00000579765 429 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MIR4298-201ENST00000584380 73 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MIR4999-201ENST00000585029 91 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AL445567.2-201ENST00000618935 498 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC112200.1-201ENST00000625015 234 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RNA5SP196-201ENST00000625967 102 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 AC096656.1-201ENST00000623826 1364 ntBASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
SMC1BQ8NDV3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 RNU6-553P-201ENST00000364047 96 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 Y_RNA.201-201ENST00000364052 96 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 SNORD46.1-201ENST00000364139 104 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 MIR554-201ENST00000384874 96 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC073069.1-201ENST00000428657 441 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 ISCA1P2-201ENST00000438679 421 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC104306.1-201ENST00000449702 371 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC009961.3-201ENST00000449832 765 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 RN7SL189P-201ENST00000468631 289 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 RPL7L1P8-201ENST00000469911 741 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC015795.1-201ENST00000513669 327 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 TCP11X3P-202ENST00000514289 1254 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 RNU6-759P-201ENST00000516740 103 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 IGKV2-36-201ENST00000519999 223 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AL358913.1-201ENST00000554342 121 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC116553.2-201ENST00000564203 463 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC084783.1-201ENST00000565846 910 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC068790.2-201ENST00000602601 557 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AL592221.1-201ENST00000605266 382 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC243756.2-201ENST00000618406 463 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC069209.1-201ENST00000619282 651 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AP003072.4-201ENST00000624580 310 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC116618.1-201ENST00000634617 774 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 DCAF13P3-201ENST00000561147 1334 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 AC011933.2-201ENST00000578539 2790 ntBASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SMC1BQ8NDV3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMC1BQ8NDV3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms