Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 MTND3P7-201ENST00000474435 343 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC108734.3-201ENST00000481241 1165 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC104687.1-201ENST00000485829 412 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPS6P4-201ENST00000494693 758 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RN7SL808P-201ENST00000496066 299 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC111193.1-201ENST00000504097 155 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 GAPDHP56-201ENST00000506031 988 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC091868.1-201ENST00000508746 304 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC023632.1-201ENST00000518463 375 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 IGLV2-28-201ENST00000520681 304 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC068790.7-201ENST00000602347 528 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC087763.1-201ENST00000603391 286 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL031281.1-201ENST00000604049 488 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 BNIP3P4-201ENST00000604946 565 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL445222.1-201ENST00000607259 628 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL354976.1-201ENST00000613843 387 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC140113.4-201ENST00000622087 222 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC006840.1-201ENST00000623069 542 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL359757.1-201ENST00000623176 255 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC087821.2-201ENST00000637086 450 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 NCLP2-201ENST00000416078 1462 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 NSRP1P1-201ENST00000444067 1693 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 Y_RNA.192-201ENST00000363977 102 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 SNORA62.2-201ENST00000364672 152 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 BTF3L4P1-201ENST00000413813 468 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 OR2AM1P-201ENST00000422137 422 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CNOT7P1-201ENST00000429006 852 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CDY14P-201ENST00000431260 1014 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC096638.2-201ENST00000434965 711 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ATP5C1P1-201ENST00000441945 895 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC073648.4-201ENST00000442655 781 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CDY23P-201ENST00000451661 1014 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 RPS27AP8-201ENST00000452665 445 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 DNAJC19P8-201ENST00000452887 259 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 FGF7P3-201ENST00000454645 303 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AURKAPS2-201ENST00000454983 333 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 MTND4LP3-201ENST00000468320 276 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC104971.1-201ENST00000495117 578 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 RPS27AP18-201ENST00000515536 459 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 IGKV2D-10-201ENST00000520194 281 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC084824.1-201ENST00000550917 1005 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 DUXAP1-201ENST00000556632 463 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms