Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP006437.1-201ENST00000641440 3685 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 MIR93-201ENST00000385024 80 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC106734.1-201ENST00000568646 663 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 TUG1_1.1-201ENST00000610654 145 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 RNA5SP126-201ENST00000365092 109 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 RNA5SP104-201ENST00000410989 118 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 MTND6P32-201ENST00000457611 483 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 FCF1P3-201ENST00000496394 590 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 CKS1BP3-201ENST00000600888 237 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 AL022311.1-201ENST00000623726 19416 ntBASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13DQ5THJ4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RNA5SP80-201ENST00000410475 111 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC009303.3-201ENST00000591103 736 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 NRBF2P5-201ENST00000603087 788 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AL163642.2-201ENST00000604722 1019 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 HIGD1AP4-201ENST00000430194 280 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC096638.2-201ENST00000434965 711 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC098824.1-201ENST00000453565 980 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RPS3AP43-201ENST00000479743 781 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC004944.1-201ENST00000517807 3059 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 YWHAQP9-201ENST00000445891 512 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC139783.2-201ENST00000504847 1145 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RNU1-143P-201ENST00000516296 146 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 U1.23-201ENST00000610293 146 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RNU1-68P-201ENST00000615382 146 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 U1.39-201ENST00000621562 146 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 OR10J6P-201ENST00000289731 930 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 UBA52P6-201ENST00000399822 382 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 USP9YP36-201ENST00000424581 829 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 USP9YP31-201ENST00000431405 881 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 RPL12P22-201ENST00000519073 490 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC006386.2-201ENST00000624491 75 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 AC012005.1-201ENST00000624575 75 ntBASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS13DQ5THJ4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 TNPO1P3-201ENST00000436471 2662 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 Z95331.1-201ENST00000623075 23112 ntBASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13DQ5THJ4 ELOCP8-201ENST00000439309 332 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms