Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Z99497.1-201ENST00000421282 135 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL953862.1-201ENST00000423016 168 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC016772.1-201ENST00000444170 1261 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC092647.2-201ENST00000452998 253 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RPS20P21-201ENST00000466859 343 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RPS6P4-201ENST00000494693 758 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 HMGB1P21-201ENST00000502313 581 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MTCYBP17-201ENST00000503579 789 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC112198.1-201ENST00000505369 1220 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MTATP6P22-201ENST00000507369 598 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC100784.1-201ENST00000522790 310 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MIR3934-201ENST00000579806 107 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC127024.5-201ENST00000580085 462 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL031985.2-201ENST00000600955 480 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AF131215.7-201ENST00000602443 707 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AL358072.1-201ENST00000604156 575 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC091953.3-201ENST00000623220 236 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 ELL2P4-201ENST00000446870 1376 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC093535.2-201ENST00000624769 2326 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
CCDC144BQ3MJ40 AL122126.1-201ENST00000546905 1318 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 SAGE4P-201ENST00000442271 3381 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 ASNSP1-201ENST00000518311 1939 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 RNA5SP123-201ENST00000363244 119 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 SNORA51.8-201ENST00000384234 132 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 HSPA8P15-201ENST00000401676 786 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL021407.1-201ENST00000404531 386 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 RNU6-920P-201ENST00000410926 92 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 MED14P1-201ENST00000430517 648 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL049745.1-201ENST00000433953 286 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL589765.3-201ENST00000446084 462 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC104634.1-201ENST00000452720 462 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 RPS3AP41-201ENST00000462701 778 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 RN7SL860P-201ENST00000473738 223 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC083982.1-201ENST00000485679 344 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC117532.1-201ENST00000514638 323 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 BRD9P1-201ENST00000529855 560 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL121766.1-201ENST00000547436 487 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC009852.2-201ENST00000567898 485 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC012435.1-202ENST00000568772 240 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AP005119.2-201ENST00000579735 1105 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 MIR4637-201ENST00000582405 84 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC040904.1-201ENST00000590850 223 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC006272.2-201ENST00000594725 163 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC245008.1-201ENST00000608123 476 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AL159169.3-201ENST00000608871 561 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC011939.3-201ENST00000613686 466 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC139792.2-201ENST00000624218 587 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 AC073869.8-201ENST00000641806 335 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 MTND5P24-201ENST00000438892 1767 ntBASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC144BQ3MJ40 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 Y_RNA.77-201ENST00000362962 107 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC136624.1-201ENST00000400791 413 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 RN7SKP16-201ENST00000410180 299 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms