Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC022790.1-201ENST00000522872 204 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX6-1P78426 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX6-1P78426 GTF2IP22-201ENST00000554443 182 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC124068.1-201ENST00000563131 678 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX6-1P78426 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 AL445222.1-201ENST00000607259 628 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC013562.2-201ENST00000611632 603 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC025594.3-201ENST00000613068 790 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 AC011978.2-201ENST00000569835 2054 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 PABPC1P9-201ENST00000426076 1612 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
NKX6-1P78426 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 ERCC6-202ENST00000374127 1782 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NKX6-1P78426 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 RNU6-1243P-201ENST00000364028 107 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 U3.10-201ENST00000364459 214 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 OR5H15-201ENST00000383696 930 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 RPL11P3-201ENST00000395256 523 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 EIF5P1-201ENST00000400019 1231 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AL645733.1-201ENST00000402250 217 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 VN1R8P-201ENST00000407739 893 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 RPL7P30-201ENST00000420888 709 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AL389915.1-201ENST00000422463 466 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX6-1P78426 LARP1BP3-201ENST00000437229 869 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX6-1P78426 TCEA1P3-201ENST00000443005 880 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 GEMIN8P3-201ENST00000445417 720 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 RNA5SP269-201ENST00000459032 137 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC026410.2-201ENST00000460281 156 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 RPL7AP6-201ENST00000477943 801 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 RPS21P4-201ENST00000487122 248 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX6-1P78426 PDCL3P4-201ENST00000489621 720 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC072052.1-201ENST00000496556 306 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC004069.2-201ENST00000505438 1114 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX6-1P78426 MTCO2P32-201ENST00000514865 403 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AC068587.4-201ENST00000533893 186 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX6-1P78426 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 RN7SL708P-201ENST00000580952 299 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL353600.1-201ENST00000608148 251 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC239868.4-201ENST00000608318 671 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AC104073.3-201ENST00000610942 955 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX6-1P78426 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NKX6-1P78426 ELL2P4-201ENST00000446870 1376 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 AC131971.1-201ENST00000332881 1482 ntBASIC4.87□□□□□ -1.63
NKX6-1P78426 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX6-1P78426 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX6-1P78426 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL450326.2-201ENST00000421913 1962 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NKX6-1P78426 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms