Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM4P67936 ZNF602P-201ENST00000405929 924 ntBASIC4.16□□□□□ -1.74
TPM4P67936 TRGV6-201ENST00000417928 299 ntBASIC4.16□□□□□ -1.74
TPM4P67936 RPS12P23-201ENST00000419579 400 ntBASIC4.16□□□□□ -1.74
TPM4P67936 RPS15AP6-201ENST00000420703 385 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TPM4P67936 TBCAP1-201ENST00000436520 327 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM4P67936 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM4P67936 RPS3AP50-201ENST00000487064 803 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.16□□□□□ -1.74
TPM4P67936 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM4P67936 AP003730.1-201ENST00000524605 285 ntBASIC4.16□□□□□ -1.74
TPM4P67936 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM4P67936 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM4P67936 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.16□□□□□ -1.74
TPM4P67936 MIR3186-201ENST00000577404 85 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC011492.1-201ENST00000600023 315 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC012213.4-201ENST00000606457 354 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AL713922.2-201ENST00000619384 716 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.16□□□□□ -1.74
TPM4P67936 AL732372.2-225ENST00000642124 456 ntBASIC4.16□□□□□ -1.74
TPM4P67936 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TPM4P67936 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM4P67936 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.16□□□□□ -1.74
TPM4P67936 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
TPM4P67936 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.15□□□□□ -1.74
TPM4P67936 AC073429.2-201ENST00000569694 1444 ntBASIC4.15□□□□□ -1.74
TPM4P67936 RNU4-39P-201ENST00000362455 127 ntBASIC4.15□□□□□ -1.75
TPM4P67936 U3.15-201ENST00000365398 212 ntBASIC4.15□□□□□ -1.75
TPM4P67936 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TPM4P67936 MTCO3P31-201ENST00000405526 789 ntBASIC4.15□□□□□ -1.75
TPM4P67936 LIPT1P1-201ENST00000415870 1186 ntBASIC4.15□□□□□ -1.75
TPM4P67936 AL691447.1-201ENST00000419456 387 ntBASIC4.15□□□□□ -1.75
TPM4P67936 AC009480.2-201ENST00000422916 432 ntBASIC4.15□□□□□ -1.75
TPM4P67936 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM4P67936 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM4P67936 SETD6P1-201ENST00000444575 317 ntBASIC4.15□□□□□ -1.75
TPM4P67936 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM4P67936 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.15□□□□□ -1.75
TPM4P67936 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.15□□□□□ -1.75
TPM4P67936 AC022695.1-201ENST00000522089 237 ntBASIC4.15□□□□□ -1.75
TPM4P67936 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM4P67936 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.15□□□□□ -1.75
TPM4P67936 RN7SL600P-201ENST00000581811 299 ntBASIC4.15□□□□□ -1.75
TPM4P67936 ARF4P1-201ENST00000605447 541 ntBASIC4.15□□□□□ -1.75
TPM4P67936 AL021707.7-201ENST00000607991 416 ntBASIC4.15□□□□□ -1.75
TPM4P67936 AC020978.9-201ENST00000624380 1141 ntBASIC4.15□□□□□ -1.75
TPM4P67936 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM4P67936 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TPM4P67936 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TPM4P67936 AC012618.3-205ENST00000637896 1496 ntBASIC4.15□□□□□ -1.75
TPM4P67936 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TPM4P67936 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
TPM4P67936 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
TPM4P67936 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 RNA5SP235-201ENST00000365411 114 ntBASIC4.14□□□□□ -1.75
TPM4P67936 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TPM4P67936 AL136116.1-201ENST00000403591 381 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AL158071.1-201ENST00000430315 461 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AL356276.2-201ENST00000435919 558 ntBASIC4.14□□□□□ -1.75
TPM4P67936 Z74696.2-201ENST00000436514 498 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AL353093.1-201ENST00000441292 436 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM4P67936 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM4P67936 RPL5P32-201ENST00000454085 879 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC006539.3-201ENST00000454258 129 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM4P67936 ACTG1P13-201ENST00000486987 1043 ntBASIC4.14□□□□□ -1.75
TPM4P67936 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM4P67936 FTH1P9-201ENST00000513251 355 ntBASIC4.14□□□□□ -1.75
TPM4P67936 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM4P67936 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.14□□□□□ -1.75
TPM4P67936 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.14□□□□□ -1.75
TPM4P67936 AL389895.1-201ENST00000554127 252 ntBASIC4.14□□□□□ -1.75
TPM4P67936 TRAV15-201ENST00000556680 249 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC106785.3-201ENST00000564064 847 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM4P67936 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
TPM4P67936 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.14□□□□□ -1.75
TPM4P67936 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 AC234771.5-201ENST00000600161 514 ntBASIC4.14□□□□□ -1.75
TPM4P67936 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 SNORA62.6-201ENST00000606322 83 ntBASIC4.14□□□□□ -1.75
TPM4P67936 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 CDRT1-208ENST00000630868 794 ntBASIC4.14□□□□□ -1.75
TPM4P67936 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM4P67936 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM4P67936 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM4P67936 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM4P67936 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TPM4P67936 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 AC066616.2-201ENST00000559334 1481 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms