Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN6P56747 HMGB3P21-201ENST00000452483 547 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 AC010469.1-201ENST00000463864 576 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 AC006499.5-201ENST00000505037 514 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 AC074250.1-201ENST00000511117 192 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 SNORD116-26-201ENST00000516006 96 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN6P56747 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN6P56747 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN6P56747 AC007423.1-201ENST00000605009 627 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 AC000123.2-201ENST00000623124 461 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN6P56747 Z73965.1-201ENST00000623412 2297 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CLDN6P56747 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN6P56747 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CLDN6P56747 MFSD8-236ENST00000641509 4050 ntBASIC3.84□□□□□ -1.8
CLDN6P56747 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CLDN6P56747 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 RNU6-666P-201ENST00000363499 107 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 MIR183-201ENST00000384958 110 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 MIR218-2-201ENST00000385006 110 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 MIR34B-201ENST00000385076 84 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 RPL31P52-201ENST00000407532 367 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN6P56747 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 PRELID3BP10-201ENST00000431957 584 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC007563.3-201ENST00000433233 371 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 Z85994.2-201ENST00000434327 452 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 PDSS1P2-201ENST00000449397 678 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC011037.1-201ENST00000483964 558 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 RPL29P14-201ENST00000495837 428 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN6P56747 RNU6-1308P-201ENST00000516817 103 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 OR4V1P-201ENST00000525394 1140 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 CYCSP30-201ENST00000546447 172 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 AC005412.1-201ENST00000580812 1049 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN6P56747 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 MIR432-201ENST00000606207 94 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN6P56747 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC019278.1-201ENST00000623516 479 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN6P56747 U6.105-201ENST00000637379 88 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 KPNA2P2-201ENST00000419546 1489 ntBASIC3.83□□□□□ -1.8
CLDN6P56747 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN6P56747 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN6P56747 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN6P56747 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLDN6P56747 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN6P56747 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CLDN6P56747 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN6P56747 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN6P56747 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN6P56747 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN6P56747 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN6P56747 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN6P56747 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN6P56747 RNU6-244P-201ENST00000391028 104 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 RPL26P37-201ENST00000411983 438 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN6P56747 RPS23P10-201ENST00000416185 486 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN6P56747 Z97055.1-201ENST00000419730 712 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 AL035423.1-201ENST00000420331 213 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN6P56747 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN6P56747 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN6P56747 RPL7P15-201ENST00000461190 712 ntBASIC3.82□□□□□ -1.8
CLDN6P56747 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN6P56747 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms