Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 VN1R34P-201ENST00000447387 883 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 RPL36AP13-201ENST00000457490 317 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC108145.1-201ENST00000503770 153 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TNFRSF4P43489 COX6B1P6-201ENST00000522347 255 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 MTND1P36-201ENST00000522384 936 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC093510.2-201ENST00000562820 896 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC027104.1-201ENST00000563702 681 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC106734.1-201ENST00000568646 663 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC107982.3-201ENST00000584957 985 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 MIR5684-201ENST00000585074 65 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 AC125494.3-201ENST00000602759 455 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 AL136370.1-201ENST00000608166 691 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 OR5BE1P-202ENST00000641168 1176 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 ERCC6-202ENST00000374127 1782 ntBASIC4.16□□□□□ -1.74
TNFRSF4P43489 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.16□□□□□ -1.74
TNFRSF4P43489 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFRSF4P43489 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TNFRSF4P43489 AC105074.1-201ENST00000623380 3095 ntBASIC4.15□□□□□ -1.74
TNFRSF4P43489 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TNFRSF4P43489 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TNFRSF4P43489 AC017007.4-201ENST00000503353 1352 ntBASIC4.15□□□□□ -1.74
TNFRSF4P43489 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.15□□□□□ -1.74
TNFRSF4P43489 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
TNFRSF4P43489 THAP12P5-201ENST00000405864 2275 ntBASIC4.15□□□□□ -1.74
TNFRSF4P43489 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.15□□□□□ -1.74
TNFRSF4P43489 AL049555.1-201ENST00000562834 1933 ntBASIC4.15□□□□□ -1.74
TNFRSF4P43489 AL672167.1-203ENST00000641299 2975 ntBASIC4.15□□□□□ -1.74
TNFRSF4P43489 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.15□□□□□ -1.74
TNFRSF4P43489 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 RNU6-213P-201ENST00000384051 104 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 MIR195-201ENST00000385194 87 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 RNA5SP171-201ENST00000391071 115 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL121878.1-201ENST00000418638 859 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC073335.1-201ENST00000427776 363 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 YWHAQP9-201ENST00000445891 512 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 GAPDHP36-201ENST00000480688 918 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC011037.1-201ENST00000483964 558 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC112518.2-201ENST00000508565 425 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 OR4A2P-201ENST00000527276 913 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC091516.1-201ENST00000549191 703 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 OR4U1P-201ENST00000554958 912 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 SETP1-201ENST00000556014 845 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 RPL21P7-201ENST00000557463 483 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC012254.4-201ENST00000588843 273 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL592436.1-201ENST00000605135 558 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC017076.1-201ENST00000607613 578 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 STMN1P1-201ENST00000617809 440 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL163051.2-201ENST00000618976 735 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC022106.2-201ENST00000620114 757 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 MIR7702-201ENST00000621931 59 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL354798.1-201ENST00000622505 329 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC024595.1-201ENST00000623088 387 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 AL592437.2-201ENST00000421655 2434 ntBASIC4.15□□□□□ -1.75
TNFRSF4P43489 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFRSF4P43489 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TNFRSF4P43489 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TNFRSF4P43489 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNFRSF4P43489 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
TNFRSF4P43489 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFRSF4P43489 AC093591.2-201ENST00000565254 3843 ntBASIC4.14□□□□□ -1.75
TNFRSF4P43489 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
TNFRSF4P43489 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNFRSF4P43489 Z95327.2-201ENST00000414579 1873 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms