Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
SHMT2P34897 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.9□□□□□ -1.79
SHMT2P34897 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.9□□□□□ -1.79
SHMT2P34897 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC079171.1-201ENST00000568788 914 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC141257.3-201ENST00000572906 215 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.9□□□□□ -1.79
SHMT2P34897 AC015911.5-201ENST00000587076 451 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHMT2P34897 AL139286.1-201ENST00000604465 483 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 AL355802.4-201ENST00000607635 548 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 MIR486-1-201ENST00000612171 68 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 MARK2P15-201ENST00000432204 2186 ntBASIC3.9□□□□□ -1.79
SHMT2P34897 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHMT2P34897 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHMT2P34897 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHMT2P34897 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 BDP1P-201ENST00000582658 1990 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SHMT2P34897 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 RNU6-666P-201ENST00000363499 107 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 MIR3074-201ENST00000384885 81 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 AC092017.2-201ENST00000427600 362 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.89□□□□□ -1.79
SHMT2P34897 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 ELOCP10-201ENST00000440624 327 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 HMGB1P5-202ENST00000451497 985 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AL161747.1-201ENST00000480068 358 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC107398.1-201ENST00000486904 505 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 IGKV2-38-201ENST00000517443 247 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 MTND1P6-201ENST00000523621 946 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 NOP56P3-201ENST00000549457 385 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.89□□□□□ -1.79
SHMT2P34897 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 MIR4286-201ENST00000580651 93 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.89□□□□□ -1.79
SHMT2P34897 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.89□□□□□ -1.79
SHMT2P34897 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.89□□□□□ -1.79
SHMT2P34897 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AL049844.2-201ENST00000604280 628 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 ELOCP34-201ENST00000604436 327 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC010200.2-201ENST00000605098 235 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC010857.1-201ENST00000606398 594 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AC107308.1-201ENST00000615897 301 ntBASIC3.89□□□□□ -1.79
SHMT2P34897 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.89□□□□□ -1.79
SHMT2P34897 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
SHMT2P34897 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
SHMT2P34897 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.89□□□□□ -1.79
SHMT2P34897 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHMT2P34897 AC114546.3-201ENST00000623582 1734 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 RNA5SP283-201ENST00000365604 119 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 SNORA57.1-201ENST00000391227 145 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AL356967.1-201ENST00000406305 431 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 MIR1193-201ENST00000408109 78 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 CYP4F29P-201ENST00000420685 446 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHMT2P34897 FAM204CP-201ENST00000424489 642 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 OR8F1P-201ENST00000425243 930 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 SEC63P1-201ENST00000425785 1258 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 HIGD1AP4-201ENST00000430194 280 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 RPS11P1-201ENST00000451072 473 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AL354710.1-201ENST00000453641 246 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC005229.2-201ENST00000456995 399 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC005912.1-201ENST00000495392 255 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 FTH1P21-201ENST00000512179 511 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 RNU6-1004P-201ENST00000516584 111 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.88□□□□□ -1.79
SHMT2P34897 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 NPM1P47-201ENST00000560843 856 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC022968.1-201ENST00000567372 442 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC022884.3-201ENST00000579571 248 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 AL391834.1-201ENST00000609609 560 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AC128687.2-201ENST00000609657 566 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AL354696.1-201ENST00000614652 497 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SHMT2P34897 AL139089.1-201ENST00000620372 975 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 MIR6500-201ENST00000622700 86 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 AL773545.4-201ENST00000637262 310 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms