Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.31□□□□□ -1.88
CTLA4P16410 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.31□□□□□ -1.88
CTLA4P16410 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC090229.1-201ENST00000590983 1609 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 MFSD8-220ENST00000641243 1422 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CTLA4P16410 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.31□□□□□ -1.88
CTLA4P16410 SNORA3.3-201ENST00000408712 125 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 TRGV6-201ENST00000417928 299 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AL390879.2-203ENST00000426943 1121 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 NPM1P24-201ENST00000428039 894 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 RPL7P4-203ENST00000430239 730 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.31□□□□□ -1.88
CTLA4P16410 NDUFB1P1-201ENST00000435191 180 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC011037.1-201ENST00000483964 558 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC018797.3-201ENST00000513388 1241 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC008489.1-201ENST00000524271 483 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC007224.1-201ENST00000564410 144 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.31□□□□□ -1.88
CTLA4P16410 AGGF1P6-201ENST00000569213 976 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC136624.4-201ENST00000573044 370 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC119501.1-201ENST00000603646 475 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC004825.2-201ENST00000616634 455 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 MIR6875-201ENST00000617506 72 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 AC020978.9-201ENST00000624380 1141 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.31□□□□□ -1.88
CTLA4P16410 AC009452.1-201ENST00000640823 606 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CTLA4P16410 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTLA4P16410 AC007529.1-201ENST00000418574 2178 ntBASIC3.31□□□□□ -1.88
CTLA4P16410 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.31□□□□□ -1.88
CTLA4P16410 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
CTLA4P16410 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CTLA4P16410 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CTLA4P16410 PPIAP31-201ENST00000405422 495 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AL691447.1-201ENST00000419456 387 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 TCEA1P2-201ENST00000420496 906 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 SETD6P1-201ENST00000444575 317 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.3□□□□□ -1.88
CTLA4P16410 NANOGP10-201ENST00000453325 895 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 UBDP1-202ENST00000457888 382 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 VN1R105P-201ENST00000486595 910 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.3□□□□□ -1.88
CTLA4P16410 OR7E13P-201ENST00000526052 910 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CTLA4P16410 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC008011.1-201ENST00000545989 227 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 CYCSP30-201ENST00000546447 172 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC141257.3-201ENST00000572906 215 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AC087499.8-201ENST00000578406 226 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AL163642.2-201ENST00000604722 1019 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AC010857.1-201ENST00000606398 594 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 AC078899.5-201ENST00000612475 178 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 AL136964.1-201ENST00000622038 2990 ntBASIC3.3□□□□□ -1.88
CTLA4P16410 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms