Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TNFP01375 HNRNPKP5-201ENST00000515300 253 ntBASIC3.57□□□□□ -1.84
TNFP01375 RN7SKP13-201ENST00000515933 244 ntBASIC3.57□□□□□ -1.84
TNFP01375 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
TNFP01375 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TNFP01375 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.57□□□□□ -1.84
TNFP01375 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFP01375 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 AC027281.1-201ENST00000574178 758 ntBASIC3.57□□□□□ -1.84
TNFP01375 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 EIF1P6-201ENST00000600054 334 ntBASIC3.57□□□□□ -1.84
TNFP01375 SRGNP1-201ENST00000603392 451 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL139286.1-201ENST00000604465 483 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL390816.3-201ENST00000604527 1066 ntBASIC3.57□□□□□ -1.84
TNFP01375 BRDTP1-201ENST00000605735 677 ntBASIC3.57□□□□□ -1.84
TNFP01375 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 AC093909.5-201ENST00000621839 1799 ntBASIC3.57□□□□□ -1.84
TNFP01375 AC009229.4-201ENST00000623854 1947 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL392088.2-201ENST00000637607 285 ntBASIC3.57□□□□□ -1.84
TNFP01375 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFP01375 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 AL365440.1-201ENST00000436135 2167 ntBASIC3.56□□□□□ -1.84
TNFP01375 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 AL627171.1-201ENST00000618845 1308 ntBASIC3.56□□□□□ -1.84
TNFP01375 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 MIR208A-201ENST00000362287 71 ntBASIC3.56□□□□□ -1.84
TNFP01375 RNA5SP50-201ENST00000363731 107 ntBASIC3.56□□□□□ -1.84
TNFP01375 RNA5SP72-201ENST00000364442 117 ntBASIC3.56□□□□□ -1.84
TNFP01375 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
TNFP01375 MIR34B-201ENST00000385076 84 ntBASIC3.56□□□□□ -1.84
TNFP01375 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFP01375 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
TNFP01375 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFP01375 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.56□□□□□ -1.84
TNFP01375 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFP01375 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.56□□□□□ -1.84
TNFP01375 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFP01375 AC092641.1-201ENST00000440229 772 ntBASIC3.56□□□□□ -1.84
TNFP01375 FTH1P24-201ENST00000503502 462 ntBASIC3.56□□□□□ -1.84
TNFP01375 AC004069.2-201ENST00000505438 1114 ntBASIC3.56□□□□□ -1.84
TNFP01375 AC090819.1-201ENST00000523800 1111 ntBASIC3.56□□□□□ -1.84
TNFP01375 AC103843.2-201ENST00000530523 682 ntBASIC3.56□□□□□ -1.84
TNFP01375 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.56□□□□□ -1.84
TNFP01375 MFSD8-236ENST00000641509 4050 ntBASIC3.56□□□□□ -1.84
TNFP01375 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFP01375 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFP01375 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFP01375 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFP01375 AC093908.1-201ENST00000623125 8092 ntBASIC3.55□□□□□ -1.84
TNFP01375 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
TNFP01375 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 AC083899.2-201ENST00000423285 1376 ntBASIC3.55□□□□□ -1.84
TNFP01375 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFP01375 MIR365B-201ENST00000362317 111 ntBASIC3.55□□□□□ -1.84
TNFP01375 RNA5SP502-201ENST00000362694 119 ntBASIC3.55□□□□□ -1.84
TNFP01375 RNA5SP387-201ENST00000364226 106 ntBASIC3.55□□□□□ -1.84
TNFP01375 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TNFP01375 AC234772.1-201ENST00000377927 937 ntBASIC3.55□□□□□ -1.84
TNFP01375 RNU6-729P-201ENST00000384399 107 ntBASIC3.55□□□□□ -1.84
TNFP01375 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
TNFP01375 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFP01375 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
TNFP01375 YWHAEP5-201ENST00000431545 765 ntBASIC3.55□□□□□ -1.84
TNFP01375 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 AC092809.1-201ENST00000441469 474 ntBASIC3.55□□□□□ -1.84
TNFP01375 EIF4A1P11-201ENST00000451239 222 ntBASIC3.55□□□□□ -1.84
TNFP01375 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFP01375 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 RFPL4AP3-201ENST00000515267 345 ntBASIC3.55□□□□□ -1.84
TNFP01375 VTA1P2-201ENST00000520205 911 ntBASIC3.55□□□□□ -1.84
TNFP01375 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFP01375 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFP01375 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFP01375 ELOCP35-201ENST00000604289 336 ntBASIC3.55□□□□□ -1.84
TNFP01375 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.55□□□□□ -1.84
TNFP01375 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFP01375 AL732618.1-201ENST00000623251 301 ntBASIC3.55□□□□□ -1.84
TNFP01375 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFP01375 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms