Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PRKNO60260 RNU1-63P-201ENST00000383902 164 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
PRKNO60260 FCF1P5-201ENST00000406490 482 ntBASIC4.14□□□□□ -1.75
PRKNO60260 RNU4-25P-201ENST00000410569 230 ntBASIC4.14□□□□□ -1.75
PRKNO60260 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC009302.1-201ENST00000417147 390 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC004690.1-201ENST00000418216 328 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC027644.1-201ENST00000419595 298 ntBASIC4.14□□□□□ -1.75
PRKNO60260 CHIAP3-201ENST00000423668 1133 ntBASIC4.14□□□□□ -1.75
PRKNO60260 RPL12P34-201ENST00000424532 479 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 NIPA2P1-201ENST00000426223 976 ntBASIC4.14□□□□□ -1.75
PRKNO60260 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.14□□□□□ -1.75
PRKNO60260 RPL21P91-201ENST00000429231 479 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 RPEP2-201ENST00000432149 701 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKNO60260 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 AC073143.1-201ENST00000436316 395 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC009263.1-201ENST00000441193 1239 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 RPL7L1P1-201ENST00000448259 785 ntBASIC4.14□□□□□ -1.75
PRKNO60260 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 RPL10P17-201ENST00000453852 316 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC011276.1-201ENST00000469688 323 ntBASIC4.14□□□□□ -1.75
PRKNO60260 RN7SL860P-201ENST00000473738 223 ntBASIC4.14□□□□□ -1.75
PRKNO60260 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKNO60260 CEACAMP10-202ENST00000495431 496 ntBASIC4.14□□□□□ -1.75
PRKNO60260 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 AC023050.2-201ENST00000544968 387 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC009094.1-201ENST00000564443 426 ntBASIC4.14□□□□□ -1.75
PRKNO60260 MTND4LP24-201ENST00000572277 291 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC091178.1-203ENST00000584586 279 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AP001269.3-201ENST00000588718 329 ntBASIC4.14□□□□□ -1.75
PRKNO60260 RNF138P2-201ENST00000603490 592 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC005191.1-201ENST00000603950 358 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC090948.1-201ENST00000607464 549 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKNO60260 AP000238.1-201ENST00000608759 426 ntBASIC4.14□□□□□ -1.75
PRKNO60260 uc_338.9-201ENST00000617424 182 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC005086.4-201ENST00000623065 213 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC017037.3-201ENST00000625016 472 ntBASIC4.14□□□□□ -1.75
PRKNO60260 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 AC104446.1-201ENST00000613728 1321 ntBASIC4.14□□□□□ -1.75
PRKNO60260 RNF6P1-201ENST00000444889 1784 ntBASIC4.14□□□□□ -1.75
PRKNO60260 AC000367.1-201ENST00000452711 1766 ntBASIC4.14□□□□□ -1.75
PRKNO60260 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKNO60260 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRKNO60260 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRKNO60260 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 RPL32P3-201ENST00000359025 275 ntBASIC4.13□□□□□ -1.75
PRKNO60260 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 RNU6-225P-201ENST00000384613 103 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC136624.1-201ENST00000400791 413 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AL079342.2-201ENST00000403367 482 ntBASIC4.13□□□□□ -1.75
PRKNO60260 ELOCP9-201ENST00000418624 239 ntBASIC4.13□□□□□ -1.75
PRKNO60260 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.13□□□□□ -1.75
PRKNO60260 RPF2P1-201ENST00000424137 906 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 SETD6P1-201ENST00000444575 317 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC233982.1-201ENST00000451247 436 ntBASIC4.13□□□□□ -1.75
PRKNO60260 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKNO60260 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
PRKNO60260 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
PRKNO60260 NIP7P2-201ENST00000485801 544 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 AC084024.2-201ENST00000503480 791 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC034244.1-201ENST00000507687 207 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms