Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC243972.3-201ENST00000539655 198 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 AC009962.1-201ENST00000567327 3813 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC034268.2-201ENST00000571784 482 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AC000068.2-201ENST00000608816 460 ntBASIC6.21□□□□□ -1.42
SOX1O00570 MIR7973-1-201ENST00000614683 76 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 MTND5P42-201ENST00000637720 498 ntBASIC6.21□□□□□ -1.42
SOX1O00570 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SOX1O00570 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AC024560.2-201ENST00000507981 1497 ntBASIC6.21□□□□□ -1.42
SOX1O00570 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
SOX1O00570 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 AC025574.1-201ENST00000554784 1653 ntBASIC6.2□□□□□ -1.42
SOX1O00570 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 AC119744.1-201ENST00000454746 1715 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX1O00570 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX1O00570 RNU6-451P-201ENST00000362921 107 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RNU6-251P-201ENST00000363235 104 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RNA5SP123-201ENST00000363244 119 ntBASIC6.2□□□□□ -1.42
SOX1O00570 Y_RNA.157-201ENST00000363638 102 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RNA5SP335-201ENST00000363817 110 ntBASIC6.2□□□□□ -1.42
SOX1O00570 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 RNU6-769P-201ENST00000384407 104 ntBASIC6.2□□□□□ -1.42
SOX1O00570 MIR640-201ENST00000385086 96 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RPS4XP9-201ENST00000405151 780 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RPS6P23-201ENST00000413224 722 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC091390.2-201ENST00000432573 374 ntBASIC6.2□□□□□ -1.42
SOX1O00570 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.2□□□□□ -1.42
SOX1O00570 RPL22P17-201ENST00000438729 315 ntBASIC6.2□□□□□ -1.42
SOX1O00570 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 USP9YP15-201ENST00000442391 422 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX1O00570 BTF3P5-201ENST00000457252 467 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX1O00570 RN7SL354P-201ENST00000469282 294 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC093278.1-201ENST00000494700 600 ntBASIC6.2□□□□□ -1.42
SOX1O00570 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX1O00570 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX1O00570 SNORA19.2-201ENST00000516013 114 ntBASIC6.2□□□□□ -1.42
SOX1O00570 RNU6-1003P-201ENST00000517099 105 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.2□□□□□ -1.42
SOX1O00570 IGLV3-6-201ENST00000523937 250 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.2□□□□□ -1.42
SOX1O00570 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 AC008126.1-201ENST00000549019 480 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC008127.2-201ENST00000549925 1075 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.2□□□□□ -1.42
SOX1O00570 TXNP4-201ENST00000575018 310 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX1O00570 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX1O00570 AC007687.1-201ENST00000602704 304 ntBASIC6.2□□□□□ -1.42
SOX1O00570 BCRP9-201ENST00000605312 388 ntBASIC6.2□□□□□ -1.42
SOX1O00570 AP001521.1-201ENST00000609150 300 ntBASIC6.2□□□□□ -1.42
SOX1O00570 IQCB2P-201ENST00000401788 1633 ntBASIC6.2□□□□□ -1.42
SOX1O00570 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 DDX18P4-201ENST00000511690 1966 ntBASIC6.2□□□□□ -1.42
SOX1O00570 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX1O00570 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX1O00570 CKAP2P1-201ENST00000555477 2049 ntBASIC6.2□□□□□ -1.42
SOX1O00570 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms