Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC104687.1-201ENST00000485829 412 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 CR383656.6-201ENST00000550518 394 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM1O00151 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM1O00151 ZNF92P3-201ENST00000596594 954 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM1O00151 AC079880.2-201ENST00000603790 1213 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AL133338.2-201ENST00000604292 736 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC005972.3-201ENST00000606304 481 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AL355816.1-201ENST00000607951 118 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC019193.2-201ENST00000610012 634 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM1O00151 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDLIM1O00151 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM1O00151 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 AL592148.3-201ENST00000608771 2646 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM1O00151 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM1O00151 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 RNU6-317P-201ENST00000384031 107 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 RNA5SP332-201ENST00000391063 115 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 PTMAP5-201ENST00000393073 333 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC069213.2-201ENST00000420238 366 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AL353093.1-201ENST00000441292 436 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM1O00151 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC004801.2-202ENST00000463559 283 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC011037.1-201ENST00000483964 558 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC111000.3-201ENST00000508057 576 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AP000827.1-201ENST00000527814 258 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC025260.1-201ENST00000548858 430 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AL389895.1-201ENST00000554127 252 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM1O00151 AC022146.1-201ENST00000595307 847 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC006254.3-201ENST00000603353 884 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC064801.1-201ENST00000612025 407 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 AC243654.2-201ENST00000612843 443 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 OR56B2P-202ENST00000641377 2453 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 MTND5P11-201ENST00000511037 1812 ntBASIC4.04□□□□□ -1.76
PDLIM1O00151 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM1O00151 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM1O00151 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM1O00151 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM1O00151 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDLIM1O00151 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM1O00151 RNU6-792P-201ENST00000363490 107 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 SNORA56-201ENST00000383966 129 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 MIR659-201ENST00000384963 97 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 LINC01347-201ENST00000417964 355 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM1O00151 UQCRBP1-201ENST00000421129 336 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 RPS27AP7-201ENST00000422792 455 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AL049610.1-201ENST00000423374 372 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 RPEP3-201ENST00000425462 676 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 CBX1P4-201ENST00000439415 457 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM1O00151 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 AL162151.2-201ENST00000448875 158 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 CYCSP42-201ENST00000450823 238 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms