Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SNORA44-201ENST00000384584 132 ntBASIC4.57□□□□□ -1.68
RGPD3A6NKT7 RN7SKP53-201ENST00000411337 315 ntBASIC4.57□□□□□ -1.68
RGPD3A6NKT7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RGPD3A6NKT7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AC092111.2-201ENST00000611627 1414 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 MAPRE1P3-201ENST00000435438 796 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AL645931.1-201ENST00000439737 410 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 MIR3945-201ENST00000581853 98 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AL451007.1-201ENST00000595491 289 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 MAPK10-303ENST00000641324 3959 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.56□□□□□ -1.68
RGPD3A6NKT7 AC119744.1-201ENST00000454746 1715 ntBASIC4.56□□□□□ -1.68
RGPD3A6NKT7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 HMGB3P20-201ENST00000417997 600 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 PPBPP1-201ENST00000510807 373 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC068020.1-201ENST00000594215 661 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC112198.2-201ENST00000426589 6996 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 OR1AA1P-201ENST00000419597 916 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 RPL7L1P13-201ENST00000511702 739 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC027309.2-201ENST00000520566 192 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AP005262.1-201ENST00000582646 997 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AL390816.3-201ENST00000604527 1066 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AC018690.1-201ENST00000608144 626 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 AP003355.3-201ENST00000623465 114 ntBASIC4.55□□□□□ -1.68
RGPD3A6NKT7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
RGPD3A6NKT7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC083843.2-201ENST00000568248 6253 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 RNA5SP126-201ENST00000365092 109 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 GNG5P5-201ENST00000420444 220 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 NPM1P25-201ENST00000429734 854 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC097262.1-201ENST00000452559 548 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC012123.2-201ENST00000485809 248 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC118465.1-201ENST00000513820 1271 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC087276.1-201ENST00000529659 480 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC004024.1-201ENST00000549244 247 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC023161.2-201ENST00000551218 780 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AP000255.1-201ENST00000610276 676 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 AC138932.5-201ENST00000617759 563 ntBASIC4.54□□□□□ -1.68
RGPD3A6NKT7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms