Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
RBFOX3A6NFN3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC008033.1-201ENST00000216407 1162 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 MIR153-1-201ENST00000384914 90 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 RPS16P5-201ENST00000406501 404 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 RANP4-201ENST00000413361 655 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC004987.3-201ENST00000413879 771 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC009237.5-201ENST00000414271 501 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC008065.1-201ENST00000428525 348 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 EIF2S2P2-201ENST00000447161 982 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 NANOGP10-201ENST00000453325 895 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC096992.1-201ENST00000459808 709 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC007686.1-201ENST00000488511 463 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC105233.1-201ENST00000498840 781 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC108157.1-201ENST00000510511 539 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AL133247.2-201ENST00000603236 482 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AL365503.1-201ENST00000605247 905 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AL133243.1-201ENST00000614487 366 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC006065.5-201ENST00000623427 349 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 MAPK10-372ENST00000641954 3413 ntBASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RBFOX3A6NFN3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 ASNSP1-204ENST00000641977 1664 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 SNORD35B-201ENST00000363660 87 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RNU1-130P-201ENST00000363930 160 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL590704.1-201ENST00000402856 794 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RNU2-6P-201ENST00000411404 190 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC234782.4-201ENST00000417646 1048 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC017083.1-201ENST00000428093 483 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL162591.2-201ENST00000449634 317 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CEACAMP6-201ENST00000452007 574 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC098824.1-201ENST00000453565 980 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL136097.1-201ENST00000456945 913 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RPL9P32-201ENST00000464118 620 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC007537.2-201ENST00000472093 511 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RPL29P14-201ENST00000495837 428 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC026784.1-201ENST00000507986 352 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 OR7H2P-201ENST00000513483 306 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 RN7SKP234-201ENST00000517173 224 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL139174.1-201ENST00000531489 886 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC006270.2-201ENST00000578523 652 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AP000919.1-202ENST00000581139 1264 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms