Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CUL4AP1-201ENST00000514750 1863 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC006504.1-201ENST00000562493 3666 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CEP170P1-201ENST00000502249 4587 ntBASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.05□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC007342.7-201ENST00000624610 2337 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC100871.1-201ENST00000507871 1456 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RWDD4P2-201ENST00000426392 563 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL451062.2-201ENST00000427515 271 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 BTG3P1-201ENST00000435859 716 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MTCO3P16-201ENST00000454456 754 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC016687.1-201ENST00000482574 353 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RWDD4P1-201ENST00000488019 565 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TRBV12-2-201ENST00000489763 344 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC093853.1-201ENST00000515689 483 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RN7SKP83-201ENST00000516512 178 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC087369.1-201ENST00000520775 996 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC005972.3-201ENST00000606304 481 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC022960.2-201ENST00000616300 666 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR8B1P-202ENST00000641132 1178 ntBASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC011155.1-201ENST00000316512 456 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RNA5SP171-201ENST00000391071 115 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NCSTNP1-201ENST00000406229 144 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC009302.1-201ENST00000417147 390 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RPL21P109-201ENST00000422213 475 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 HMGB3P10-201ENST00000434734 572 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL133244.1-201ENST00000456007 258 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC034236.1-201ENST00000469891 373 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC022695.1-201ENST00000522089 237 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CBX3P5-201ENST00000552017 521 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC068446.3-201ENST00000555285 382 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL121839.1-201ENST00000556233 1185 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC099489.2-201ENST00000574976 260 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CCDC58P3-201ENST00000590792 430 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC023813.4-201ENST00000607580 580 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MIR6075-201ENST00000620782 95 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CR381670.1-201ENST00000624291 1693 ntBASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC022893.2-201ENST00000564832 3296 ntBASIC3.02□□□□□ -1.93
TCRBV4S1A1TA0A5B7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.02□□□□□ -1.93
TCRBV4S1A1TA0A5B7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms