Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AL161713.1-201ENST00000555538 145 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AP003117.1-201ENST00000602771 554 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC115621.1-201ENST00000604653 858 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC120053.1-201ENST00000607706 736 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC245100.7-201ENST00000609678 442 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC015813.4-201ENST00000610469 179 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC005962.2-201ENST00000611427 652 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC000123.2-201ENST00000623124 461 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC008013.2-202ENST00000637965 364 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC025125.1-201ENST00000624743 1922 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 SNORA70.2-201ENST00000364506 135 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RNU6-481P-201ENST00000384194 107 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 SNORA51.12-201ENST00000384448 134 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 MTATP6P31-201ENST00000406985 692 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC004022.2-201ENST00000413824 193 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RPS23P10-201ENST00000416185 486 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RBMY1KP-201ENST00000423480 476 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RPL23AP81-201ENST00000455252 467 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RPL32P14-201ENST00000463196 378 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 CYCSP20-201ENST00000473154 315 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC011037.1-201ENST00000483964 558 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RN7SL691P-201ENST00000494487 301 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC108145.1-201ENST00000503770 153 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC106806.2-201ENST00000509365 500 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 RN7SKP122-201ENST00000515923 296 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC023575.1-201ENST00000580510 358 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 KPNA2P3-201ENST00000584190 848 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 MIR7154-201ENST00000620673 73 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC006249.1-201ENST00000621223 471 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AP006248.2-201ENST00000623309 592 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 MIR6830-201ENST00000636015 70 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AC074029.4-201ENST00000624796 1859 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 AL133243.3-201ENST00000617415 3004 ntBASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4BQ9Y4P1 ASNSP1-204ENST00000641977 1664 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 SNORA63.3-201ENST00000362682 132 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RNU6-984P-201ENST00000363236 109 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RNU1-132P-201ENST00000364300 164 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 GCNT6-201ENST00000379591 934 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RN7SKP235-201ENST00000410662 305 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC011933.1-201ENST00000413334 321 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC008173.1-201ENST00000418901 264 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 AC116533.1-201ENST00000459748 321 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RPS26P28-201ENST00000470806 348 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RPL35P6-201ENST00000490024 372 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
ATG4BQ9Y4P1 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms