Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 EIF1P6-201ENST00000600054 334 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AL021368.1-201ENST00000607490 540 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 CR589904.2-201ENST00000612533 440 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC090246.1-201ENST00000616499 426 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 MIR7151-201ENST00000617477 60 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC090506.2-201ENST00000624521 419 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC134882.1-201ENST00000603738 1676 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC007390.2-201ENST00000606229 3803 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 SNORA70C-201ENST00000384538 135 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 Z86062.1-201ENST00000406773 777 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 COX6CP17-201ENST00000421389 185 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 C4BPAP2-201ENST00000428434 478 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AL358472.1-201ENST00000431295 329 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 CACYBPP1-201ENST00000438592 684 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 XKRY2-201ENST00000442362 1093 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AL500522.2-201ENST00000448562 343 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 RPL7AP52-201ENST00000458096 790 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MTND2P31-201ENST00000512602 616 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MTND1P6-201ENST00000523621 946 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AL133457.1-201ENST00000564251 987 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC025627.2-201ENST00000576220 160 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MTCO3P22-201ENST00000603219 784 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MIR378J-201ENST00000611988 109 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC023043.4-201ENST00000612081 449 ntBASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.67□□□□□ -1.82
TRAPPC4Q9Y296 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 MTND4P21-201ENST00000453886 1357 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 PRO1804-201ENST00000623780 2050 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 RPL32P3-201ENST00000359025 275 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 NDUFA5P10-201ENST00000432147 357 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC089999.1-201ENST00000460336 374 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 PPIAP15-201ENST00000479662 484 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC098799.1-201ENST00000504752 800 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 IGBP1P5-201ENST00000507524 1000 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 SNORD116-26-201ENST00000516006 96 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 SMARCE1P4-201ENST00000523647 241 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AGGF1P8-201ENST00000562979 1000 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms