Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 XIAPP3-201ENST00000312918 795 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 STAG3L4-201ENST00000352103 530 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 RNU6-1329P-201ENST00000365664 107 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 Y_RNA.439-201ENST00000384119 94 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 SNORA7B-201ENST00000384360 139 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 RNU6-658P-201ENST00000384606 106 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC007098.1-201ENST00000420122 367 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC092423.1-201ENST00000430165 186 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 RPS7P3-201ENST00000443360 580 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 TPT1P13-201ENST00000449760 499 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC234782.3-201ENST00000461229 433 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC093023.1-201ENST00000547375 507 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 OR5BK1P-201ENST00000550421 823 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC008555.7-201ENST00000605008 583 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL591516.1-201ENST00000611326 274 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL031777.2-201ENST00000611953 196 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC069234.4-201ENST00000621276 412 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL354702.2-202ENST00000641481 890 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 HSPD1P8-201ENST00000400121 1658 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AL109809.4-201ENST00000603520 2185 ntBASIC7.08□□□□□ -1.28
LHX6Q9UPM6 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC027088.4-201ENST00000611559 1947 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 SNORD35A-201ENST00000363389 86 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 Y_RNA.292-201ENST00000364904 97 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 RNU1-11P-201ENST00000383975 164 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 RNU6-131P-201ENST00000391144 107 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 RNA5SP115-201ENST00000411160 107 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 FTOP1-201ENST00000419363 861 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL162725.1-201ENST00000435405 301 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 FABP5P2-201ENST00000439042 408 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC114982.1-201ENST00000469402 321 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC140059.1-201ENST00000489238 361 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 CHCHD2P7-201ENST00000508008 452 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 ACA59.1-201ENST00000515966 143 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC109479.2-201ENST00000517842 174 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC010186.2-204ENST00000537668 439 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 RN7SL473P-201ENST00000580341 299 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL158151.4-201ENST00000600965 507 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC092960.1-201ENST00000604762 351 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC034102.8-201ENST00000615146 484 ntBASIC7.07□□□□□ -1.28
LHX6Q9UPM6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AL596275.2-204ENST00000641628 552 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms