Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RFPL1S-203ENST00000539579 330 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 MTND1P8-201ENST00000571424 950 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 MIR4789-201ENST00000577469 82 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC018754.1-201ENST00000607486 925 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC116447.1-201ENST00000613153 453 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC007546.1-201ENST00000619452 559 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AL445437.1-201ENST00000623157 3087 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 MTND4P10-201ENST00000446199 1363 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 HSPA8P1-201ENST00000425843 1833 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC009951.1-201ENST00000623674 2614 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL590240.1-201ENST00000334118 313 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RNA5SP191-201ENST00000362585 102 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC097374.1-203ENST00000400783 485 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RPS27AP11-201ENST00000402798 447 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 HMGB1P13-201ENST00000406019 642 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RHEBP3-201ENST00000411920 351 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 MTCO1P54-201ENST00000430139 712 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RRM2P4-201ENST00000441721 562 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL162591.2-201ENST00000449634 317 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL009048.1-201ENST00000450437 298 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC008280.2-201ENST00000455473 307 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC053481.1-201ENST00000467217 306 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 RPL31P61-201ENST00000496160 376 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AP003717.3-201ENST00000544832 1180 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 HAUS8P1-201ENST00000549005 542 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC084757.1-201ENST00000559987 490 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC010735.1-201ENST00000567305 1026 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC018618.2-201ENST00000604770 446 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AL133243.1-201ENST00000614487 366 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AP001002.2-201ENST00000625137 386 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC008993.2-201ENST00000631744 806 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC132825.7-201ENST00000638744 335 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 AC009452.1-201ENST00000640823 606 ntBASIC4.05□□□□□ -1.76
NDE1Q9NXR1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
NDE1Q9NXR1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 OR11H4-201ENST00000315409 1082 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RNA5SP123-201ENST00000363244 119 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RNU6-452P-201ENST00000384406 107 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 MIR765-201ENST00000390226 114 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RNA5SP397-201ENST00000391323 118 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 HMGB3P18-201ENST00000406327 590 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 SPTLC1P2-201ENST00000407089 121 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RN7SKP177-201ENST00000410567 355 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms