Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 TPT1P3-201ENST00000492841 512 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC012170.1-201ENST00000495139 359 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC147055.1-201ENST00000509261 750 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC239803.2-201ENST00000610161 430 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC004943.3-201ENST00000624116 600 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC092159.4-201ENST00000624944 550 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AF001550.2-201ENST00000636643 217 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TREX1Q9NSU2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TREX1Q9NSU2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RNU1-18P-201ENST00000363062 164 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 U1.1-201ENST00000384101 164 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC136624.1-201ENST00000400791 413 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RN7SKP56-201ENST00000410513 331 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 CASKP1-201ENST00000412870 582 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RPL21P109-201ENST00000422213 475 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RSL24D1P6-201ENST00000426934 401 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 C4BPAP2-201ENST00000428434 478 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AL117339.2-201ENST00000430475 180 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 SNORA71B-202ENST00000439232 272 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AL353093.1-201ENST00000441292 436 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC006326.1-201ENST00000445465 787 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AL162151.2-201ENST00000448875 158 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 CEACAMP10-202ENST00000495431 496 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC108941.1-201ENST00000502853 530 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC092593.2-201ENST00000513866 913 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC092747.2-201ENST00000545069 983 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AL133457.1-201ENST00000564251 987 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC120057.2-201ENST00000571520 271 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 BMS1P7-201ENST00000602440 1052 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 AC091905.1-201ENST00000624400 311 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 FAM35DP-201ENST00000323387 2712 ntBASIC3.83□□□□□ -1.8
TREX1Q9NSU2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TREX1Q9NSU2 MAPK10-372ENST00000641954 3413 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 SPRR2C-201ENST00000290702 219 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 RNA5SP97-201ENST00000365006 84 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 RNU6-891P-201ENST00000384280 111 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 RPL30P3-201ENST00000424262 333 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 OR8F1P-201ENST00000425243 930 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 RPL21P89-201ENST00000444021 467 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AC104629.2-201ENST00000468627 598 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 STRADBP1-201ENST00000478954 1281 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AC015726.1-201ENST00000602353 681 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AC107905.1-201ENST00000616204 426 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 OR5AC4P-202ENST00000642086 985 ntBASIC3.82□□□□□ -1.8
TREX1Q9NSU2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.82□□□□□ -1.8
TREX1Q9NSU2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 AC087565.3-202ENST00000642085 1603 ntBASIC3.81□□□□□ -1.8
TREX1Q9NSU2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TREX1Q9NSU2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms