Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 RNU6-481P-201ENST00000384194 107 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 FCF1P5-201ENST00000406490 482 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 PTGES3P2-201ENST00000407942 482 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 UBE2D3P3-201ENST00000426992 425 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AL132765.1-201ENST00000434165 553 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC113192.3-201ENST00000529152 742 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 OR4C2P-201ENST00000530855 1064 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AP001781.1-201ENST00000530977 207 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC079075.1-201ENST00000559543 878 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC074051.3-201ENST00000570238 358 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AC115286.1-201ENST00000604298 434 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 MIR6748-201ENST00000610433 71 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 MIR7703-201ENST00000620784 77 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AL359757.1-201ENST00000623176 255 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AL355852.1-201ENST00000454081 1771 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 DBF4P1-201ENST00000412976 1892 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 AL133383.2-201ENST00000622958 2336 ntBASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4AQ9BY43 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 SGO1P1-201ENST00000603525 1447 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RNU1-83P-201ENST00000363426 164 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RNU1-32P-201ENST00000363937 159 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL592291.1-201ENST00000403830 352 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC073264.1-201ENST00000411508 416 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 OR51A3P-201ENST00000413596 924 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RPL7P53-201ENST00000421245 739 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 CENPIP1-201ENST00000425713 902 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL592437.1-201ENST00000443781 492 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 CDC42P1-201ENST00000456658 548 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RPS15AP1-201ENST00000457423 391 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RPL5P24-201ENST00000463742 885 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RPL31P13-201ENST00000484151 370 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC104164.2-201ENST00000496953 495 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RNU2-58P-201ENST00000516403 183 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RAB9BP1-201ENST00000519581 626 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC004217.3-201ENST00000551552 878 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 MIR4715-201ENST00000584117 79 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 BPIFA4P-203ENST00000603168 689 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AL356218.2-201ENST00000605264 187 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 COX6CP4-201ENST00000605798 228 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC008966.2-201ENST00000606157 453 ntBASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4AQ9BY43 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CHMP4AQ9BY43 IQCB2P-201ENST00000401788 1633 ntBASIC5.85□□□□□ -1.47
CHMP4AQ9BY43 LINC00622-201ENST00000562811 1570 ntBASIC5.85□□□□□ -1.47
CHMP4AQ9BY43 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4AQ9BY43 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.85□□□□□ -1.47
CHMP4AQ9BY43 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms