Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 RNU4-1-201ENST00000363925 141 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC009804.1-201ENST00000400949 179 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL590143.1-201ENST00000405071 138 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PGBD4P6-201ENST00000421501 610 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC019097.1-201ENST00000424783 735 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 RPL21P110-201ENST00000433345 446 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 OR3D1P-201ENST00000438288 955 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL390119.1-201ENST00000440329 312 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 FTLP8-201ENST00000446770 267 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 HMGB1P15-201ENST00000453854 435 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PTMAP1-205ENST00000455552 325 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC083982.1-201ENST00000485679 344 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC090958.1-201ENST00000511122 351 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1220P-201ENST00000517126 108 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 SNORA43.3-201ENST00000517240 103 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC090572.1-201ENST00000519251 160 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC005332.4-201ENST00000592752 579 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL670379.11-201ENST00000604059 253 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL670379.10-201ENST00000604330 253 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL670379.12-201ENST00000605291 253 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AL670379.9-201ENST00000605428 253 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PLCE1P1-201ENST00000622094 305 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC010149.2-201ENST00000637608 315 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 OR52H1-202ENST00000641796 1061 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC119674.1-204ENST00000641348 1343 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC093297.3-201ENST00000607056 2517 ntBASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.41□□□□□ -1.38
COL25A1Q9BXS0 AC011592.1-201ENST00000624647 3634 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RPL23P2-201ENST00000320371 421 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 SNORD16-201ENST00000362803 99 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1159P-201ENST00000362933 107 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.126-201ENST00000363382 111 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNA5SP240-201ENST00000365355 128 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.389-201ENST00000383924 113 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNU6-662P-201ENST00000384253 104 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNU6-452P-201ENST00000384406 107 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 SNRPEP6-201ENST00000407465 277 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.646-201ENST00000410980 101 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DNAJC19P7-201ENST00000428811 344 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AL132765.1-201ENST00000434165 553 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RPS17P8-201ENST00000434525 335 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RSU1P2-202ENST00000437884 485 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 SNRPEP7-201ENST00000438350 220 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DDX3P2-201ENST00000446138 111 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 GSTA11P-201ENST00000452866 669 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms