Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FKBP1AP1-201ENST00000594588 318 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RNF138P2-201ENST00000603490 592 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC119501.1-201ENST00000603646 475 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 IMMP1LP3-201ENST00000604197 224 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC004948.1-201ENST00000609858 672 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC005332.10-201ENST00000612725 619 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC009878.1-201ENST00000621819 340 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC073348.1-201ENST00000623002 331 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 CDRT1-208ENST00000630868 794 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC005332.5-201ENST00000591222 2919 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 SCN1A-220ENST00000641603 12506 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 MTND5P29-201ENST00000458676 1807 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 OR14L1P-202ENST00000641545 3009 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 RNU1-94P-201ENST00000362627 173 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 SNORA74A-201ENST00000364089 198 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 SNORA4.1-201ENST00000364263 144 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RNU6-621P-201ENST00000364752 109 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 SNORA16A-201ENST00000384342 137 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RNU6-171P-201ENST00000384354 107 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL133264.1-201ENST00000407157 562 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RPL23AP47-201ENST00000408017 460 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RN7SKP142-201ENST00000411236 328 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC004690.1-201ENST00000418216 328 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 MTCO2P34-201ENST00000421994 607 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 RPS11P7-201ENST00000442125 465 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 NOP56P2-201ENST00000447491 769 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL591363.1-201ENST00000450091 483 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC022431.1-201ENST00000450941 438 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 KATNBL1P6-201ENST00000453433 915 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC005229.2-201ENST00000456995 399 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 CYCSP34-201ENST00000458172 304 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RN7SL799P-201ENST00000475891 298 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC072039.1-201ENST00000477611 581 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC058823.1-201ENST00000485315 474 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 NIP7P2-201ENST00000485801 544 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 UBA52P7-201ENST00000486088 380 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 ACTG1P13-201ENST00000486987 1043 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC113430.1-201ENST00000506872 718 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 LTV1P1-201ENST00000510683 1237 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC006427.1-201ENST00000514359 712 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RN7SKP31-201ENST00000516354 278 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RNU6-885P-201ENST00000516607 104 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AP001189.2-201ENST00000527320 189 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 SUGT1P3-202ENST00000604259 383 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC011626.1-201ENST00000604710 562 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 TAS2R6P-201ENST00000605022 826 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AL021997.1-201ENST00000605757 193 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC124312.6-202ENST00000623624 418 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX18Q96RF0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX18Q96RF0 MTND5P24-201ENST00000438892 1767 ntBASIC4.73□□□□□ -1.65
SNX18Q96RF0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms