Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC012339.2-201ENST00000523996 453 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL391156.1-201ENST00000554965 554 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL359219.2-201ENST00000555184 348 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 TRAV15-201ENST00000556680 249 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC128687.1-201ENST00000605304 619 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL354760.1-201ENST00000608357 643 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC243756.2-201ENST00000618406 463 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC092656.1-203ENST00000624134 423 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL356121.2-201ENST00000624715 780 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC009313.2-201ENST00000417893 1941 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 ATP5F1P4-201ENST00000397288 746 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL078599.1-201ENST00000402075 293 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL121978.1-201ENST00000402778 359 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 PIGPP2-201ENST00000411569 458 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC068533.2-201ENST00000411872 306 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL136133.1-201ENST00000413694 376 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RPL23AP39-201ENST00000415533 405 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC062016.2-201ENST00000420950 676 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MTCO3P30-201ENST00000426425 670 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MUPP-201ENST00000438111 566 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 COX6CP2-201ENST00000444980 225 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AP000936.2-201ENST00000447151 681 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 TCEA1P1-201ENST00000449716 880 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC116337.2-201ENST00000477662 156 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC093270.2-201ENST00000486157 792 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC010350.1-201ENST00000504908 231 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC090071.1-201ENST00000507713 644 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 LTV1P1-201ENST00000510683 1237 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MTCO2P32-201ENST00000514865 403 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RNU6-488P-201ENST00000515918 99 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RNU2-30P-201ENST00000516209 141 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RNA5SP43-201ENST00000516559 110 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RPL23AP53-201ENST00000521854 457 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AP000873.5-201ENST00000533906 236 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 NMNAT1P1-201ENST00000554095 876 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC006362.1-201ENST00000567392 174 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC011260.1-201ENST00000578420 472 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC017100.2-201ENST00000584628 355 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RSL24D1P11-201ENST00000591045 491 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 U73023.1-201ENST00000603134 700 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 PSMA6P4-201ENST00000603247 718 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC087763.1-201ENST00000603391 286 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC080078.2-201ENST00000603766 501 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 MTCYBP22-201ENST00000603788 447 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC073869.10-201ENST00000642016 354 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 AC073136.1-201ENST00000449426 2884 ntBASIC4.69□□□□□ -1.66
CTHRC1Q96CG8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 HSPA8P18-201ENST00000439846 1928 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms