Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PTP4A1Q93096 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTP4A1Q93096 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.15□□□□□ -1.75
PTP4A1Q93096 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.75
PTP4A1Q93096 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC008725.1-201ENST00000605123 2263 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC103591.2-201ENST00000265259 766 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 RNA5SP189-201ENST00000364920 115 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 RNU6-441P-201ENST00000384545 106 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AL121978.1-201ENST00000402778 359 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 RN7SKP167-201ENST00000411047 285 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 B3GNT2P1-201ENST00000434960 952 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 OR1H1P-201ENST00000448731 937 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC108463.1-201ENST00000450258 347 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 RPS26P28-201ENST00000470806 348 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 SCARNA22-201ENST00000503991 125 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC005921.1-201ENST00000510589 286 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MTCO1P30-201ENST00000515244 580 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 RNU2-58P-201ENST00000516403 183 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC010476.1-201ENST00000519111 851 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC090151.1-201ENST00000520784 730 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AP001922.4-201ENST00000526967 290 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC010735.1-201ENST00000567305 1026 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MTCO1P40-201ENST00000574371 625 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MIR3934-201ENST00000579806 107 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC008536.1-201ENST00000602872 669 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AL139286.1-201ENST00000604465 483 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC002487.1-201ENST00000604565 994 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC013468.1-201ENST00000608680 598 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AP000255.1-201ENST00000610276 676 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC068722.2-201ENST00000618734 544 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 AC006249.1-201ENST00000621223 471 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PTP4A1Q93096 MTND5P31-201ENST00000419366 1374 ntBASIC4.14□□□□□ -1.75
PTP4A1Q93096 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTP4A1Q93096 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 RNU6-207P-201ENST00000384137 107 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 MTATP6P19-201ENST00000413797 659 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 NANOGP6-201ENST00000429190 847 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 UBE2V1P6-201ENST00000430840 422 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC044797.1-201ENST00000445744 679 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 HIGD1AP8-201ENST00000453927 274 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 ISCUP1-201ENST00000454451 448 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 RN7SL610P-201ENST00000463845 291 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC090013.1-201ENST00000485147 480 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 RPL32P9-201ENST00000487963 407 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 NDUFA5P12-201ENST00000503796 343 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC005798.1-201ENST00000513715 387 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms