Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR6758-201ENST00000620653 63 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC090506.2-201ENST00000624521 419 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL592437.2-201ENST00000421655 2434 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RPL32P3-201ENST00000359025 275 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RPS26P8-201ENST00000393490 348 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 HSPE1P8-201ENST00000406997 288 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RHEBP3-201ENST00000411920 351 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RNF19BPX-201ENST00000426224 625 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 MTCO1P57-201ENST00000432182 261 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC114878.1-201ENST00000441166 358 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 CALM1P2-201ENST00000452941 448 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC098824.1-201ENST00000453565 980 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RPL5P13-201ENST00000462840 709 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 CEACAMP10-202ENST00000495431 496 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC012414.2-201ENST00000559474 187 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC099489.2-201ENST00000574976 260 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC107308.1-201ENST00000615897 301 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC009032.1-201ENST00000617574 431 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AL139089.1-201ENST00000620372 975 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC091905.1-201ENST00000624400 311 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC092159.4-201ENST00000624944 550 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 AC007342.7-201ENST00000624610 2337 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 CR381670.1-201ENST00000624291 1693 ntBASIC3.27□□□□□ -1.89
RTN4IP1Q8WWV3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 MTND4P10-201ENST00000446199 1363 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 SNORA62-201ENST00000365493 153 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 SNORA70C-201ENST00000384538 135 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 SNORD65-201ENST00000391079 73 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AL022722.2-201ENST00000402519 180 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AL049693.1-201ENST00000402760 611 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AL512504.1-201ENST00000415494 778 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 RPL7P53-201ENST00000421245 739 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 C4BPAP2-201ENST00000428434 478 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 RPL7P31-201ENST00000450192 724 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 MTND2P3-201ENST00000452458 470 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 HMGB3P21-201ENST00000452483 547 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AP002345.1-201ENST00000456493 928 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC104629.2-201ENST00000468627 598 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC021205.1-201ENST00000468797 348 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC011037.1-201ENST00000483964 558 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC034244.2-201ENST00000514668 858 ntBASIC3.26□□□□□ -1.89
RTN4IP1Q8WWV3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms