Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC018529.3-201ENST00000624212 2254 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC009229.4-201ENST00000623854 1947 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 FAM35DP-201ENST00000323387 2712 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC073073.2-201ENST00000609827 2578 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 MIR490-201ENST00000384865 128 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 RPS7P15-201ENST00000415804 584 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 BX119904.1-201ENST00000432026 348 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 SYT14P1-201ENST00000481459 721 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 OR10D4P-201ENST00000525892 951 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 AC092747.2-201ENST00000545069 983 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.82□□□□□ -1.8
SHROOM3Q8TF72 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 MIR128-1-201ENST00000384921 82 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 RPL21P109-201ENST00000422213 475 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 PDSS1P2-201ENST00000449397 678 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 RN7SKP18-201ENST00000516005 275 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AC133552.5-201ENST00000604266 540 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AC016252.1-201ENST00000609721 474 ntBASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SHROOM3Q8TF72 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 MAPK10-320ENST00000641462 6696 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC087190.4-201ENST00000574616 8334 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RNA5SP267-201ENST00000364893 126 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 ZNF603P-201ENST00000405613 487 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 TCEA1P2-201ENST00000420496 906 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC002075.2-201ENST00000425207 252 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 SNORA71B-202ENST00000439232 272 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 MTND6P5-201ENST00000448266 512 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC099560.2-201ENST00000457554 255 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC069499.1-201ENST00000489433 509 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 HMGN1P15-201ENST00000513870 295 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC022149.2-201ENST00000621061 203 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 PRO1804-201ENST00000623780 2050 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RPL23AP82-202ENST00000427528 469 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC074367.1-201ENST00000438685 1125 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 CENPBD1P1-201ENST00000464061 469 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 RN7SL809P-201ENST00000482040 297 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
SHROOM3Q8TF72 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms